Costa M M, Sandoval-Denis M, Moreira G M, Kandemir H, Kermode A, Buddie A G, Ryan M J, Becker Y, Yurkov A, Maier W, Groenewald J Z, Pfenning L H, Crous P W
Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands.
Department of Plant Pathology, Universidade Federal de Lavras, 37200-900, Lavras MG, Brazil.
Stud Mycol. 2024 Dec;109:403-450. doi: 10.3114/sim.2024.109.06. Epub 2024 Sep 26.
The species complex (FLSC) currently comprises 11 phylogenetic species, including accepted names such as , , and , which have mostly been reported in association with citrus and coffee. Many varieties were documented by Wollenweber & Reinking (1935), which is indicative of a wider diversity of species within this group. The lack of type material in some cases, especially for the older names, means that definition by molecular phylogeny is very difficult. In the present study, we examined 179 strains related to from different countries and substrates. Historic reference material, including representative strains from the Wollenweber & Reinking (1935) varieties were included in this study, DNA sequences were generated for comparison, and the morphology correlated with original descriptions to enable the correct application of older names. Strains were characterized by multi-gene phylogenetic analyses based on fragments of the β-tubulin (), calmodulin (), RNA polymerase II second largest subunit (), and translation elongation factor 1-alpha () genes, evaluation of morphological characters and host-substrate preferences. The biological species concept was tested by crossings . Strains previously identified as , , or one of their varieties based on morphology, were found to belong to 16 species in the FLSC, but also to species from six other species complexes (SC), including the SC, SC, SC, SC, SC, and the SC. Eleven new phylogenetic and two biological species are described in the FLSC, and emended descriptions are provided for four previously described species. An epitype is designated for , and var. , a former variety within the FLSC, is lecto- and epitypified, and elevated to species level with a replacement name. M.M. Costa, Sand.-Den. & Crous, M.M. Costa, Sand.-Den. & Crous, L. Zhao & J.X. Deng, M.M. Costa, L.H. Pfenning, Sand.-Den. & Crous, M.M. Costa, Sand.-Den. & Crous, M.M. Costa, Sand.-Den. & Crous, M.M. Costa, Sand.-Den. & Crous, M.M. Costa, Sand.-Den. & Crous; M.M. Costa, Sand.-Den. & Crous, M.M. Costa, Sand.-Den. & Crous, M.M. Costa, Sand.-Den. & Crous, M.M. Costa, Sand.-Den. & Crous; M.M. Costa, Sand.-Den. & Crous; Nees, var. Wollenw.; var. Wollenw. Costa MM, Sandoval-Denis M, Moreira GM, Kandemir H, Kermode A, Buddie AG, Ryan MJ, Becker Y, Yurkov A, Maier W, Groenewald JZ, Pfenning LH, Crous PW (2024). Known from trees and the tropics: new insights into the species complex. : 403-450. doi: 10.3114/sim.2024.109.06.
该类群复合体(FLSC)目前包含11个系统发育种,包括已被认可的名称,如 、 和 ,这些大多是在与柑橘和咖啡相关的情况下被报道的。Wollenweber和Reinking(1935年)记录了许多变种,这表明该类群内物种具有更广泛的多样性。在某些情况下,特别是对于较古老的名称,缺乏模式材料意味着通过分子系统发育进行定义非常困难。在本研究中,我们检查了来自不同国家和基质的与 相关的179个菌株。本研究纳入了历史参考材料,包括来自Wollenweber和Reinking(1935年)变种的代表性菌株,生成DNA序列用于比较,并将形态与原始描述相关联,以便正确应用较古老的名称。通过基于β-微管蛋白()、钙调蛋白()、RNA聚合酶II第二大亚基()和翻译延伸因子1-α()基因片段的多基因系统发育分析、形态特征评估和寄主-基质偏好对菌株进行表征。通过杂交试验检验了生物学种概念。以前根据形态鉴定为 、 或其变种之一的菌株,被发现属于FLSC中的16个种,但也属于其他六个种复合体(SC)中的种,包括 SC、 SC、 SC、 SC、 SC和 SC。在FLSC中描述了11个新的系统发育种和2个生物学种,并对四个先前描述的种提供了修订描述。为 指定了一个后选模式,并且对FLSC内的一个先前变种 var. 进行了选模式和后选模式指定,并提升到种级并赋予一个替代名称。 M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯, M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯, 赵L和邓JX, M.M. 科斯塔、L.H. 普芬宁、桑多瓦尔 - 丹尼斯和克劳斯, M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯, M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯, M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯, M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯; M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯, M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯, M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯, M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯; M.M. 科斯塔、桑多瓦尔 - 丹尼斯和克劳斯; 内斯, var. 沃伦威; var. 沃伦威。 科斯塔MM、桑多瓦尔 - 丹尼斯M、莫雷拉GM、坎德米尔H、克莫德A、巴迪AG、瑞安MJ、贝克尔Y、尤尔科夫A、迈尔W、格罗内瓦尔德JZ、普芬宁LH、克劳斯PW(2024年)。从树木和热带地区得知:关于该类群复合体的新见解。 : 403 - 450。doi: 10.3114/sim.2024.109.06。