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组氨酸15位乙酰胺修饰的鸡蛋清溶菌酶的结构:老朋友带来的惊喜。

The structure of His15 acetamide-modified hen egg-white lysozyme: a nice surprise from an old friend.

作者信息

Malanho da Silva Jose, Lanuza Jose, Bruno Francesco, Calderone Vito, Ravera Enrico

机构信息

Department of Chemistry `Ugo Schiff', Università degli Studi di Firenze, Via della Lastruccia 3, 50019 Sesto Fiorentino, Italy.

出版信息

Acta Crystallogr F Struct Biol Commun. 2025 Feb 1;81(Pt 2):41-46. doi: 10.1107/S2053230X2500010X. Epub 2025 Jan 13.

Abstract

Hen egg-white lysozyme (HEWL) is a small polycationic protein which is highly soluble and stable. This has led to it becoming a molecular laboratory' where chemical biological operations and structural techniques are tested. To date, HEWL accounts for 1233 PDB entries, roughly 0.5% of the total, making it the best-represented protein in the PDB. With the aim of unambiguously identifying the N atom of the His15 side chain that is most reactive towards iodoacetamide, the structure of chemically modified HEWL was determined by crystallizing it using the 15 minutes lysozyme' protocol. This protocol invariably yields tetragonal crystals of the unmodified protein. To our surprise, we found that the crystals of the modified protein had similar unit-cell parameters but that refinement was only possible when considering an orthorhombic system.

摘要

鸡蛋清溶菌酶(HEWL)是一种高度可溶且稳定的小分子聚阳离子蛋白。这使得它成为一个“分子实验室”,用于测试化学生物学操作和结构技术。迄今为止,HEWL在蛋白质数据银行(PDB)中有1233个条目,约占总数的0.5%,使其成为PDB中代表性最好的蛋白质。为了明确鉴定His15侧链中对碘乙酰胺反应性最强的氮原子,通过使用“15分钟溶菌酶”方案对化学修饰的HEWL进行结晶,确定了其结构。该方案总是能得到未修饰蛋白的四方晶体。令我们惊讶的是,我们发现修饰后蛋白的晶体具有相似的晶胞参数,但只有在考虑正交晶系时才能进行精修。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d972/11783178/6fc7843f8626/f-81-00041-fig1.jpg

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