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. 中LbDof转录因子家族基因的全基因组鉴定与表达分析

Genome-Wide Identification and Expression Analysis of the LbDof Transcription Factor Family Genes in .

作者信息

Wang Yuchang, Wang Hongrui, Li Weinan, Dai Guoli, Chen Jinhuan

机构信息

College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, China.

State Key Laboratory of Efficient Production of Forest Resources, Beijing Forestry University, Beijing 100083, China.

出版信息

Plants (Basel). 2025 May 22;14(11):1567. doi: 10.3390/plants14111567.

DOI:10.3390/plants14111567
PMID:40508247
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12157807/
Abstract

, a nutrient-rich fruit known for its resilience to drought and high salinity, presents an opportunity to explore stress tolerance at the molecular level. This study explores the molecular mechanisms underlying stress tolerance and fruit development in by characterizing its Dof transcription factor family. Through genomic analysis, 39 genes were identified, with their structural, phylogenetic, and physicochemical properties systematically examined. -acting regulatory element analysis revealed motifs associated with growth, stress, light, and hormone responses, while expression profiling demonstrated organ-specific patterns and significant upregulation under drought and saline-alkaline stress. Additionally, dynamic expression changes were observed across fruit development stages, suggesting regulatory roles in maturation. Phylogenetic classification grouped genes into ten subgroups, with chromosomal mapping indicating segmental duplications as a key evolutionary driver. Furthermore, the study offers a comprehensive genomic and functional analysis of genes, highlighting their potential roles in stress adaptation and fruit maturation. The findings provide a theoretical basis for breeding stress-resistant crops and insights into enhancing plant resilience.

摘要

[水果名称]是一种营养丰富的水果,以其对干旱和高盐度的耐受性而闻名,为在分子水平上探索胁迫耐受性提供了机会。本研究通过对其Dof转录因子家族进行表征,探索了[水果名称]胁迫耐受性和果实发育的分子机制。通过基因组分析,鉴定出39个[水果名称]基因,并系统地研究了它们的结构、系统发育和理化性质。顺式作用调控元件分析揭示了与生长、胁迫、光和激素反应相关的基序,而表达谱分析显示了器官特异性模式以及在干旱和盐碱胁迫下的显著上调。此外,在果实发育阶段观察到动态表达变化,表明其在成熟过程中的调控作用。系统发育分类将[水果名称]基因分为十个亚组,染色体定位表明片段重复是关键的进化驱动因素。此外,该研究对[水果名称]基因进行了全面的基因组和功能分析,突出了它们在胁迫适应和果实成熟中的潜在作用。这些发现为培育抗逆作物提供了理论基础,并为增强植物抗逆性提供了见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/284ee67199a5/plants-14-01567-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/6c508c21672d/plants-14-01567-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/263709372e9f/plants-14-01567-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/ae6fb9060a34/plants-14-01567-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/828667cb0338/plants-14-01567-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/6a11dd95bdcb/plants-14-01567-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/d79afe468c56/plants-14-01567-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/dc5968faeca8/plants-14-01567-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/0a5080260b96/plants-14-01567-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/284ee67199a5/plants-14-01567-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/6c508c21672d/plants-14-01567-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/263709372e9f/plants-14-01567-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/ae6fb9060a34/plants-14-01567-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/828667cb0338/plants-14-01567-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/6a11dd95bdcb/plants-14-01567-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/d79afe468c56/plants-14-01567-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/dc5968faeca8/plants-14-01567-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/0a5080260b96/plants-14-01567-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de1/12157807/284ee67199a5/plants-14-01567-g009.jpg

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Ensembl 2024.Ensembl 2024.
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Genome-wide binding analysis of the tomato transcription factor SlDof1 reveals its regulatory impacts on fruit ripening.番茄转录因子SlDof1的全基因组结合分析揭示了其对果实成熟的调控作用。
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