美国牙科研究协会可视化工具：一种用于来自艾伦古代DNA资源的古代人类DNA的ArcGIS在线可视化工具。

The AADR Visualizer: An ArcGIS Online Visualizer for ancient human DNA from the Allen Ancient DNA Resource.

作者信息

Yi Woojung, Delroba Elliot, Zizzamia Beth, Spera Stephanie, Yang Melinda A

机构信息

Department of Biology, University of Richmond, Richmond, VA, 23173, United States of America.

Department of Geography, Environment, and Sustainability, University of Richmond, Richmond, VA 23173, United States of America.

出版信息

Bioinformatics. 2025 Aug 18;5(1). doi: 10.1093/bioadv/vbaf199.

DOI:10.1093/bioadv/vbaf199

PMID:40831291

原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12413226/

Abstract

MOTIVATION

The AADR Visualizer is designed to be a public, user-friendly, web-based graphical user interface for visualizing and filtering ancient humans included in the Allen Ancient DNA Resource (AADR), a regularly updated dataset that compiles published human genome-wide ancient DNA for research uses. This tool increases access to the rapidly growing pool of human ancient DNA available for study, facilitating genomic research and education focused on human prehistoric movement and interaction.

RESULTS

The AADR Visualizer provides the ability to 1) view all available individuals and associated metadata, 2) filter individuals using a diverse set of geographic, temporal, and sequencing information, and 3) search for individuals using group nomenclature as described in the Allen Ancient DNA Resource.

AVAILABILITY AND IMPLEMENTATION

The tool is freely available on the web at https://arcg.is/1CyL5n.

摘要

动机

AADR可视化工具旨在成为一个面向公众、用户友好的基于网络的图形用户界面，用于可视化和筛选艾伦古代DNA资源（AADR）中包含的古代人类，AADR是一个定期更新的数据集，汇编了已发表的全基因组古代人类DNA以供研究使用。该工具增加了对可用于研究的快速增长的人类古代DNA库的访问，促进了专注于人类史前迁徙和互动的基因组研究与教育。