• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

定义KpnI家族片段的起始和终止位置。

Defining the beginning and end of KpnI family segments.

作者信息

Grimaldi G, Skowronski J, Singer M F

出版信息

EMBO J. 1984 Aug;3(8):1753-9. doi: 10.1002/j.1460-2075.1984.tb02042.x.

DOI:10.1002/j.1460-2075.1984.tb02042.x
PMID:6090124
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC557592/
Abstract

Comparison of the sequences at the ends of several newly cloned and full length members of the monkey KpnI family with one another and with previously described monkey and human segments defines the nucleotide sequence at the two termini. No terminal repeats either direct or inverted are noted within full length family members which may or may not be immediately flanked by direct repeats. At the 3' terminus, several family members have polyadenylation signals followed by a d(A)-rich stretch. The genomic frequency of segments within the full length element increases markedly from the 5' to the 3' terminus, consistent with the cloning of various truncated family members. One such truncated version joined to a low copy number DNA segment is inserted in monkey alpha-satellite where the combination appears to have been amplified in conjunction with the satellite itself.

摘要

将几个新克隆的猴KpnI家族全长成员末端的序列相互比较,并与先前描述的猴和人类片段进行比较,确定了两个末端的核苷酸序列。在全长家族成员中未发现正向或反向的末端重复序列,这些成员可能紧邻也可能不紧邻正向重复序列。在3'末端,几个家族成员具有多聚腺苷酸化信号,随后是富含d(A)的片段。全长元件内片段的基因组频率从5'末端到3'末端显著增加,这与各种截短家族成员的克隆结果一致。一个这样的截短版本与一个低拷贝数DNA片段相连,插入到猴α卫星中,在那里这种组合似乎与卫星本身一起被扩增。

相似文献

1
Defining the beginning and end of KpnI family segments.定义KpnI家族片段的起始和终止位置。
EMBO J. 1984 Aug;3(8):1753-9. doi: 10.1002/j.1460-2075.1984.tb02042.x.
2
Interruption of an alpha-satellite array by a short member of the KpnI family of interspersed, highly repeated monkey DNA sequences.散布的高度重复的猴DNA序列的KpnI家族的一个短成员对α-卫星阵列的中断。
Mol Cell Biol. 1983 Jun;3(6):967-73. doi: 10.1128/mcb.3.6.967-973.1983.
3
Members of the KpnI family of long interspersed repeated sequences join and interrupt alpha-satellite in the monkey genome.长散在重复序列KpnI家族的成员在猴基因组中连接并中断α卫星序列。
Nucleic Acids Res. 1983 Jan 25;11(2):321-38. doi: 10.1093/nar/11.2.321.
4
A monkey Alu sequence is flanked by 13-base pair direct repeats by an interrupted alpha-satellite DNA sequence.一个猴Alu序列由13个碱基对的同向重复序列侧翼包围,并被一个中断的α卫星DNA序列隔开。
Proc Natl Acad Sci U S A. 1982 Mar;79(5):1497-500. doi: 10.1073/pnas.79.5.1497.
5
Genomic organization of low copy number sequences that are associated with deca-satellite DNA in the monkey genome.与猴子基因组中的十聚体卫星DNA相关的低拷贝数序列的基因组组织。
Nucleic Acids Res. 1987 Nov 11;15(21):8799-813. doi: 10.1093/nar/15.21.8799.
6
Three segments from the monkey genome that hybridize to simian virus 40 have common structural elements.来自猴基因组的三个片段与猿猴病毒40杂交,具有共同的结构元件。
Mol Cell Biol. 1981 Dec;1(12):1061-8. doi: 10.1128/mcb.1.12.1061-1068.1981.
7
Unusual class of Alu sequences containing a potential Z-DNA segment.一类含有潜在Z-DNA片段的异常Alu序列。
Mol Cell Biol. 1983 May;3(5):960-4. doi: 10.1128/mcb.3.5.960-964.1983.
8
alpha DNA in African green monkey cells is organized into extremely long tandem arrays.
J Biol Chem. 1986 Feb 15;261(5):2314-8.
9
KpnI families of long, interspersed repetitive DNAs in human and other primate genomes.人类及其他灵长类基因组中长散布重复DNA的KpnI家族。
Nucleic Acids Res. 1982 May 25;10(10):3175-93. doi: 10.1093/nar/10.10.3175.
10
Interspersed repeated sequences in the African green monkey genome that are homologous to the human Alu family.非洲绿猴基因组中与人类Alu家族同源的散布重复序列。
Nucleic Acids Res. 1981 Nov 11;9(21):5553-68. doi: 10.1093/nar/9.21.5553.

引用本文的文献

1
Regulatory logic and transposable element dynamics in nematode worm genomes.线虫基因组中的调控逻辑与转座元件动态变化
bioRxiv. 2024 Sep 16:2024.09.15.613132. doi: 10.1101/2024.09.15.613132.
2
Locus-resolution analysis of L1 regulation and retrotransposition potential in mouse embryonic development.L1 调控和逆转座潜能的基因座分辨率分析在小鼠胚胎发育中的作用。
Genome Res. 2023 Sep;33(9):1465-1481. doi: 10.1101/gr.278003.123. Epub 2023 Oct 5.
3
Interchromosomal translocation in neural progenitor cells exposed to L1 retrotransposition.

本文引用的文献

1
Interruption of an alpha-satellite array by a short member of the KpnI family of interspersed, highly repeated monkey DNA sequences.散布的高度重复的猴DNA序列的KpnI家族的一个短成员对α-卫星阵列的中断。
Mol Cell Biol. 1983 Jun;3(6):967-73. doi: 10.1128/mcb.3.6.967-973.1983.
2
Highly repeated sequences in mammalian genomes.哺乳动物基因组中的高度重复序列。
Int Rev Cytol. 1982;76:67-112. doi: 10.1016/s0074-7696(08)61789-1.
3
Looking for relationships between the most repeated dispersed DNA sequences in the mouse: small R elements are found associated consistently with long MIF repeats.
暴露于L1逆转录转座的神经祖细胞中的染色体间易位。
Genet Mol Biol. 2023 Jan 30;46(1):e20220268. doi: 10.1590/1678-4685-GMB-2022-0268. eCollection 2023.
4
The interferon stimulated gene-encoded protein HELZ2 inhibits human LINE-1 retrotransposition and LINE-1 RNA-mediated type I interferon induction.干扰素刺激基因编码蛋白 HELZ2 抑制人类 LINE-1 反转录转座和 LINE-1 RNA 介导的 I 型干扰素诱导。
Nat Commun. 2023 Jan 13;14(1):203. doi: 10.1038/s41467-022-35757-6.
5
Subfamily-specific differential contribution of individual monomers and the tether sequence to mouse L1 promoter activity.单个单体和连接序列对小鼠L1启动子活性的亚家族特异性差异贡献。
Mob DNA. 2022 Apr 20;13(1):13. doi: 10.1186/s13100-022-00269-z.
6
Clinically silent LINE 1 insertion in the PNPLA3 gene may impede genotyping of the p.I148M variant.PNPLA3 基因中临床无沉默的 LINE1 插入可能会阻碍 p.I148M 变异型的基因分型。
Sci Rep. 2021 Oct 22;11(1):20924. doi: 10.1038/s41598-021-00425-0.
7
The Interplay Among HIV, LINE-1, and the Interferon Signaling System.HIV、LINE-1 与干扰素信号系统的相互作用。
Front Immunol. 2021 Sep 9;12:732775. doi: 10.3389/fimmu.2021.732775. eCollection 2021.
8
Unbiased proteomic mapping of the LINE-1 promoter using CRISPR Cas9.使用CRISPR Cas9对LINE-1启动子进行无偏倚蛋白质组学图谱分析。
Mob DNA. 2021 Aug 23;12(1):21. doi: 10.1186/s13100-021-00249-9.
9
Interpopulation differences of retroduplication variations (RDVs) in rice retrogenes and their phenotypic correlations.水稻反转录基因中反转重复变异(RDV)的群体间差异及其表型相关性。
Comput Struct Biotechnol J. 2021 Jan 5;19:600-611. doi: 10.1016/j.csbj.2020.12.046. eCollection 2021.
10
Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia.机器学习揭示了人类神经元和神经胶质中体细胞 L1 插入的双侧分布。
Nat Neurosci. 2021 Feb;24(2):186-196. doi: 10.1038/s41593-020-00767-4. Epub 2021 Jan 11.
寻找小鼠中最常见的分散DNA序列之间的关系:发现小R元件始终与长MIF重复序列相关联。
EMBO J. 1984 Feb;3(2):467-72. doi: 10.1002/j.1460-2075.1984.tb01829.x.
4
The distribution of interspersed repeats is nonuniform and conserved in the mouse and human genomes.散布重复序列在小鼠和人类基因组中的分布是不均匀且保守的。
Proc Natl Acad Sci U S A. 1983 Apr;80(7):1816-20. doi: 10.1073/pnas.80.7.1816.
5
The L1Md long interspersed repeat family in the mouse: almost all examples are truncated at one end.小鼠中的L1Md长散在重复序列家族:几乎所有实例在一端都是截短的。
Nucleic Acids Res. 1983 Dec 20;11(24):8847-59. doi: 10.1093/nar/11.24.8847.
6
Rearranged sequences of a human Kpn I element.人类Kpn I元件的重排序列。
Proc Natl Acad Sci U S A. 1984 Feb;81(4):1012-6. doi: 10.1073/pnas.81.4.1012.
7
The Bam repeats of the mouse genome belong in several superfamilies the longest of which is over 9 kb in size.小鼠基因组的Bam重复序列属于几个超家族,其中最长的超过9千碱基对。
Nucleic Acids Res. 1984 Feb 10;12(3):1593-608. doi: 10.1093/nar/12.3.1593.
8
Some KpnI family members are associated with the Alu family in the human genome.在人类基因组中,一些KpnI家族成员与Alu家族相关联。
Nucleic Acids Res. 1983 Oct 11;11(19):6837-46. doi: 10.1093/nar/11.19.6837.
9
Organization of the R family and other interspersed repetitive DNA sequences in the mouse genome.小鼠基因组中R家族及其他散布重复DNA序列的组织方式。
J Mol Biol. 1983 Oct 25;170(2):255-70. doi: 10.1016/s0022-2836(83)80147-8.
10
Homology between the KpnI primate and BamH1 (M1F-1) rodent families of long interspersed repeated sequences.灵长类动物KpnI家族与啮齿动物BamH1(M1F-1)家族长散在重复序列之间的同源性。
Nucleic Acids Res. 1983 Aug 25;11(16):5739-45. doi: 10.1093/nar/11.16.5739.