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寻找小鼠中最常见的分散DNA序列之间的关系:发现小R元件始终与长MIF重复序列相关联。

Looking for relationships between the most repeated dispersed DNA sequences in the mouse: small R elements are found associated consistently with long MIF repeats.

作者信息

Bennett K L, Hastie N D

出版信息

EMBO J. 1984 Feb;3(2):467-72. doi: 10.1002/j.1460-2075.1984.tb01829.x.

DOI:10.1002/j.1460-2075.1984.tb01829.x
PMID:6714224
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC557367/
Abstract

Four highly-repeated dispersed DNA sequence families have been described in the mouse genome. These are the three small elements B1, B2 and R and the large (6 kb) MIF element. Together these comprise approximately 10% of the mouse genome. Possible relationships between these families are pertinent to the genome as a whole. We report here that the B1s, B2s and Rs are all randomly organized in the genome with respect to each other. Surprisingly though, the R and MIF families are found together consistently in a set of random genomic clones and in selected clones. We find Rs often located on one end of the MIF at a consistent site and conclude that a minority of Rs are an integral part of MIF while the majority of Rs are not associated with MIFs. We propose that isolated R elements are truncated forms of MIF. Also we speculate on the mechanism of dispersal of these elements through the mouse genome.

摘要

在小鼠基因组中已发现了四个高度重复的分散DNA序列家族。它们是三个小元件B1、B2和R以及大的(6kb)MIF元件。这些元件共同构成了小鼠基因组的约10%。这些家族之间可能的关系与整个基因组相关。我们在此报告,B1、B2和R在基因组中彼此随机排列。然而,令人惊讶的是,在一组随机基因组克隆和选定克隆中,R和MIF家族始终共同出现。我们发现R常常位于MIF一端的一个固定位点,并得出结论,少数R是MIF的组成部分,而大多数R与MIF无关。我们提出,孤立的R元件是MIF的截短形式。此外,我们还推测了这些元件在小鼠基因组中扩散的机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/90dbc22d7440/emboj00306-0203-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/ae8c9c52e7c5/emboj00306-0201-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/35cc1a3e09ed/emboj00306-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/2f31a12f7c98/emboj00306-0202-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/90dbc22d7440/emboj00306-0203-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/ae8c9c52e7c5/emboj00306-0201-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/35cc1a3e09ed/emboj00306-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/2f31a12f7c98/emboj00306-0202-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cc2a/557367/90dbc22d7440/emboj00306-0203-a.jpg

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本文引用的文献

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Low molecular weight RNAs transcribed in vitro by RNA polymerase III from Alu-type dispersed repeats in Chinese hamster DNA are also found in vivo.
EMBO J. 1984 Aug;3(8):1753-9. doi: 10.1002/j.1460-2075.1984.tb02042.x.
4
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Nucleic Acids Res. 1987 Sep 25;15(18):7395-410. doi: 10.1093/nar/15.18.7395.
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Analysis of LINE-1 family sequences on a single monkey chromosome.对单个猴子染色体上的LINE-1家族序列的分析。
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