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一些含有分散重复序列的Alu家族的染色体外环状DNA可能是逆转录产物。

Some extrachromosomal circular DNAs containing the Alu family of dispersed repetitive sequences may be reverse transcripts.

作者信息

Krolewski J J, Rush M G

出版信息

J Mol Biol. 1984 Mar 25;174(1):31-40. doi: 10.1016/0022-2836(84)90363-2.

DOI:10.1016/0022-2836(84)90363-2
PMID:6325707
Abstract

A 300 base-pair (bp) size class of small polydisperse circular DNA (spcDNA) isolated from the BSC-1 line of African Green monkey kidney cells was cleaved with the restriction endonuclease Sau3A, and the resulting fragments (100 to 200 bp) were cloned in bacteriophage M13 mp7. The nucleotide sequence of each of 24 clones containing DNA sequences homologous to the Alu family of mobile, dispersed, repetitive elements was then determined. Analysis of these sequences revealed that many, and perhaps all, of the 300 bp Alu-containing spcDNAs had regions in which the 5' and 3' ends of the normal Alu element were juxtaposed and covalently joined. Although more than one model can explain the generation of such circular molecules, the most attractive one at this time involves their generation from reverse transcripts of Alu-specific RNAs.

摘要

从非洲绿猴肾细胞的BSC-1系中分离出的一类300个碱基对(bp)大小的小多分散环状DNA(spcDNA),用限制性内切酶Sau3A进行切割,得到的片段(100至200bp)克隆到噬菌体M13 mp7中。然后测定了24个含有与Alu家族可移动、分散、重复元件的DNA序列同源的克隆的核苷酸序列。对这些序列的分析表明,许多(也许是所有)含有300bp Alu的spcDNA都有正常Alu元件的5'和3'末端并列并共价连接的区域。虽然不止一种模型可以解释这种环状分子的产生,但目前最有吸引力的模型是它们由Alu特异性RNA的逆转录产物产生。

相似文献

1
Some extrachromosomal circular DNAs containing the Alu family of dispersed repetitive sequences may be reverse transcripts.一些含有分散重复序列的Alu家族的染色体外环状DNA可能是逆转录产物。
J Mol Biol. 1984 Mar 25;174(1):31-40. doi: 10.1016/0022-2836(84)90363-2.
2
Structure of extrachromosomal circular DNAs containing both the Alu family of dispersed repetitive sequences and other regions of chromosomal DNA.包含分散重复序列的Alu家族和染色体DNA其他区域的染色体外环状DNA的结构。
J Mol Biol. 1984 Mar 25;174(1):41-54. doi: 10.1016/0022-2836(84)90364-4.
3
The KpnI family of long interspersed nucleotide sequences is present on discrete sizes of circular DNA in monkey (BSC-1) cells.长散布核苷酸序列的KpnI家族存在于猴(BSC-1)细胞中不同大小的环状DNA上。
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Sequence repetition and genomic distribution of small polydisperse circular DNA purified from HeLa cells.从HeLa细胞中纯化的小多分散环状DNA的序列重复和基因组分布。
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Molecular characterization of small polydisperse circular deoxyribonucleic acid from an African green monkey cell line.来自非洲绿猴细胞系的小多分散环状脱氧核糖核酸的分子特征分析。
Biochemistry. 1982 Apr 27;21(9):2076-85. doi: 10.1021/bi00538a015.
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Discrete size classes of monkey extrachromosomal circular DNA containing the L1 family of long interspersed nucleotide sequences are produced by a general non-sequence specific mechanism.
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Sequence organization of repetitive sequences enriched in small polydisperse circular DNAs from HeLa cells.来自HeLa细胞的富含小多分散环状DNA的重复序列的序列组织。
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Members of the Alu family of interspersed, repetitive DNA sequences are in the small circular DNA population of monkey cells grown in culture.散布的重复性DNA序列的Alu家族成员存在于培养的猴细胞的小环状DNA群体中。
J Mol Biol. 1982 Jan 25;154(3):399-415. doi: 10.1016/s0022-2836(82)80003-x.
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Interspersed repeated sequences in the African green monkey genome that are homologous to the human Alu family.非洲绿猴基因组中与人类Alu家族同源的散布重复序列。
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Human Sau3A repeated DNA is enriched in small polydisperse circular DNA from normal lymphocytes.人类Sau3A重复DNA在正常淋巴细胞的小多分散环状DNA中富集。
Gene. 1986;46(2-3):153-60. doi: 10.1016/0378-1119(86)90399-9.

引用本文的文献

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Formation of extrachromosomal circular DNA in HeLa cells by nonhomologous recombination.通过非同源重组在HeLa细胞中形成染色体外环状DNA。
Nucleic Acids Res. 1994 Jul 11;22(13):2447-52. doi: 10.1093/nar/22.13.2447.
2
Reverse transcription of Drosophila mobile dispersed genetic element RNAs: detection of intermediate forms.果蝇移动分散遗传元件RNA的逆转录:中间形式的检测
Nucleic Acids Res. 1984 Oct 11;12(19):7533-48. doi: 10.1093/nar/12.19.7533.
3
L1 sequences in HeLa extrachromosomal circular DNA: evidence for circularization by homologous recombination.
HeLa细胞染色体外环状DNA中的L1序列:同源重组介导环化的证据
Proc Natl Acad Sci U S A. 1985 Apr;82(7):1989-93. doi: 10.1073/pnas.82.7.1989.
4
Molecular cloning and characterization of small polydisperse circular DNA from mouse 3T6 cells.来自小鼠3T6细胞的小多分散环状DNA的分子克隆与特性分析
Nucleic Acids Res. 1986 Oct 24;14(20):7823-38. doi: 10.1093/nar/14.20.7823.
5
Characterization of repetitive sequence families in mouse heart small polydisperse circular DNAs: age-related studies.小鼠心脏小多分散环状DNA中重复序列家族的表征:与年龄相关的研究。
Nucleic Acids Res. 1988 May 11;16(9):3889-906. doi: 10.1093/nar/16.9.3889.
6
A long interspersed (LINE) DNA exhibiting polymorphic patterns in human genomes.一种在人类基因组中呈现多态性模式的长散在(LINE)DNA。
Proc Natl Acad Sci U S A. 1986 Jul;83(13):4854-8. doi: 10.1073/pnas.83.13.4854.
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Multiple mechanisms generate extrachromosomal circular DNA in Chinese hamster ovary cells.多种机制在中国仓鼠卵巢细胞中产生染色体外环状DNA。
Nucleic Acids Res. 1986 Apr 25;14(8):3527-38. doi: 10.1093/nar/14.8.3527.
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A model for DNA sequence evolution within transposable element families.转座元件家族内DNA序列进化的一个模型。
Genetics. 1986 Feb;112(2):393-407. doi: 10.1093/genetics/112.2.393.
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Nucleic Acids Res. 1985 Nov 25;13(22):8247-58. doi: 10.1093/nar/13.22.8247.
10
Transposon-like sequences in extrachromosomal circular DNA from mouse thymocytes.来自小鼠胸腺细胞的染色体外环状DNA中的类转座子序列。
Proc Natl Acad Sci U S A. 1985 Apr;82(7):2072-6. doi: 10.1073/pnas.82.7.2072.