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A genetic screen identifies cellular factors involved in retroviral -1 frameshifting.

作者信息

Lee S I, Umen J G, Varmus H E

机构信息

Department of Microbiology, University of California, San Francisco 94143, USA.

出版信息

Proc Natl Acad Sci U S A. 1995 Jul 3;92(14):6587-91. doi: 10.1073/pnas.92.14.6587.

DOI:10.1073/pnas.92.14.6587
PMID:7604038
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC41563/
Abstract

To identify cellular factors that function in -1 ribosomal frameshifting, we have developed assays in the yeast Saccharomyces cerevisiae to screen for host mutants in which frameshifting is specifically affected. Expression vectors have been constructed in which the mouse mammary tumor virus gag-pro frameshift region is placed upstream of the lacZ gene or the CUP1 gene so that the reporters are in the -1 frame relative to the initiation codon. These vectors have been used to demonstrate that -1 frameshifting is recapitulated in yeast in response to retroviral mRNA signals. Using these reporters, we have isolated spontaneous host mutants in two complementation groups, ifs1 and ifs2, in which frameshifting is increased 2-fold. These mutants are also hypersensitive to antibiotics that target the 40S ribosomal subunit. We have cloned the IFS1 gene and shown that it encodes a previously undescribed protein of 1091 aa with clusters of acidic residues in the carboxyl-terminal region. Haploid cells lacking 82% of the IFS1 open reading frame are viable and phenotypically identical to ifs1-1 mutants. This approach could help identify potential targets for antiretroviral agents.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/083f4f6ebb24/pnas01490-0384-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/255527cb5b4a/pnas01490-0382-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/6cb75acfe6b0/pnas01490-0383-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/a37a70a57af2/pnas01490-0384-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/083f4f6ebb24/pnas01490-0384-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/255527cb5b4a/pnas01490-0382-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/6cb75acfe6b0/pnas01490-0383-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/a37a70a57af2/pnas01490-0384-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7d30/41563/083f4f6ebb24/pnas01490-0384-b.jpg

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引用本文的文献

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Translational errors: from yeast to new therapeutic targets.翻译错误:从酵母到新的治疗靶点。

本文引用的文献

1
Mutational analysis of pre-mRNA splicing in Saccharomyces cerevisiae using a sensitive new reporter gene, CUP1.利用一种灵敏的新报告基因CUP1对酿酒酵母前体mRNA剪接进行突变分析。
Genetics. 1993 Apr;133(4):851-63. doi: 10.1093/genetics/133.4.851.
2
An accuracy center in the ribosome conserved over 2 billion years.核糖体中的一个精确中心在超过20亿年的时间里一直保守存在。
Proc Natl Acad Sci U S A. 1993 Oct 15;90(20):9538-41. doi: 10.1073/pnas.90.20.9538.
3
Protein localization to the nucleolus: a search for targeting domains in nucleolin.
FEMS Yeast Res. 2010 Dec;10(8):1070-82. doi: 10.1111/j.1567-1364.2010.00684.x. Epub 2010 Oct 18.
4
An atypical RNA pseudoknot stimulator and an upstream attenuation signal for -1 ribosomal frameshifting of SARS coronavirus.一种非典型RNA假结刺激因子以及严重急性呼吸综合征冠状病毒 -1核糖体移码的上游衰减信号
Nucleic Acids Res. 2005 Jul 29;33(13):4265-75. doi: 10.1093/nar/gki731. Print 2005.
5
Analysis of natural variants of the human immunodeficiency virus type 1 gag-pol frameshift stem-loop structure.人类免疫缺陷病毒1型gag-pol移码茎环结构的天然变体分析。
J Virol. 2002 Aug;76(15):7868-73. doi: 10.1128/jvi.76.15.7868-7873.2002.
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Ribosomal protein L5 helps anchor peptidyl-tRNA to the P-site in Saccharomyces cerevisiae.核糖体蛋白L5有助于将肽基-tRNA锚定在酿酒酵母的P位点上。
RNA. 2001 Aug;7(8):1084-96. doi: 10.1017/s1355838201001480.
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Upf1p, Nmd2p, and Upf3p regulate the decapping and exonucleolytic degradation of both nonsense-containing mRNAs and wild-type mRNAs.Upf1p、Nmd2p和Upf3p调节含无义密码子的mRNA以及野生型mRNA的脱帽和核酸外切酶降解。
Mol Cell Biol. 2001 Mar;21(5):1515-30. doi: 10.1128/MCB.21.5.1515-1530.2001.
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