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柴油食烷菌新种,一种从海水和深海沉积物中分离出的新型烷烃降解细菌。

Alcanivorax dieselolei sp. nov., a novel alkane-degrading bacterium isolated from sea water and deep-sea sediment.

作者信息

Liu Chenli, Shao Zongze

机构信息

Key Laboratory of Marine Biogenetic Resources, Third Institute of Oceanography, State Oceanic Administration, People's Republic of China.

出版信息

Int J Syst Evol Microbiol. 2005 May;55(Pt 3):1181-1186. doi: 10.1099/ijs.0.63443-0.

DOI:10.1099/ijs.0.63443-0
PMID:15879252
Abstract

Two bacterial strains, B-5(T) and NO1A, were isolated from the surface water of the Bohai Sea and deep-sea sediment of the east Pacific Ocean, respectively. Both strains were halophilic, aerobic, Gram-negative, non-spore-forming, catalase- and oxidase-positive motile rods. They grew on a restricted spectrum of organic compounds, including some organic acids and alkanes. On the basis of 16S rRNA gene sequence similarity, strains B-5(T) and NO1A were shown to belong to the gamma-Proteobacteria. Highest similarity values were found with Alcanivorax venustensis (95.2 %), Alcanivorax jadensis (94.6 %) and Alcanivorax borkumensis (94.1 %). Principal fatty acids of both strains were C(16 : 0), C(16 : 1)omega7c and C(18 : 1)omega7c. The chemotaxonomically characteristic fatty acid C(19 : 0) cyclo omega8c was also detected. On the basis of the above, together with results of physiological and biochemical tests, DNA-DNA hybridization, comparisons of 16S-23S internal transcribed spacer sequences and comparisons of the partial deduced amino acid sequence of alkane hydroxylase, both strains were affiliated to the genus Alcanivorax but were differentiated from recognized Alcanivorax species. Therefore, a novel species, Alcanivorax dieselolei sp. nov., represented by strains B-5(T) and NO1A is proposed, with the type strain B-5(T) (=DSM 16502(T)=CGMCC 1.3690(T)).

摘要

分别从渤海表层水和东太平洋深海沉积物中分离出两株细菌菌株,即B-5(T)和NO1A。两株菌株均为嗜盐、需氧、革兰氏阴性、无芽孢形成、过氧化氢酶和氧化酶阳性的运动杆菌。它们能在包括一些有机酸和烷烃在内的有限种类有机化合物上生长。基于16S rRNA基因序列相似性,菌株B-5(T)和NO1A被证明属于γ-变形菌纲。与优雅食烷菌(95.2%)、贾氏食烷菌(94.6%)和博氏食烷菌(94.1%)的相似性值最高。两株菌株的主要脂肪酸为C(16 : 0)、C(16 : 1)ω7c和C(18 : 1)ω7c。还检测到了化学分类学特征性脂肪酸C(19 : 0)环ω8c。基于以上结果,结合生理生化试验、DNA-DNA杂交、16S-23S内转录间隔区序列比较以及烷烃羟化酶部分推导氨基酸序列比较,两株菌株均隶属于食烷菌属,但与已确认的食烷菌属物种不同。因此,提出一个新物种,柴油食烷菌(Alcanivorax dieselolei sp. nov.),以菌株B-5(T)和NO1A为代表,模式菌株为B-5(T)(=DSM 16502(T)=CGMCC 1.3690(T))。

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