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使用快照分数从神经尖峰序列数据中恢复因果模式。

Causal pattern recovery from neural spike train data using the Snap Shot Score.

作者信息

Echtermeyer Christoph, Smulders Tom V, Smith V Anne

机构信息

School of Biology, University of St Andrews, St Andrews, KY16 9TS, UK.

Institute of Neuroscience, The Henry Wellcome Building for Neuroecology, Newcastle University, Newcastle upon Tyne, NE2 4HH, UK.

出版信息

J Comput Neurosci. 2010 Aug;29(1-2):231-252. doi: 10.1007/s10827-009-0174-2. Epub 2009 Jul 31.

Abstract

We present a new approach to learning directed information flow networks from multi-channel spike train data. A novel scoring function, the Snap Shot Score, is used to assess potential networks with respect to their quality of causal explanation for the data. Additionally, we suggest a generic concept of plausibility in order to assess network learning techniques under partial observability conditions. Examples demonstrate the assessment of networks with the Snap Shot Score, and neural network simulations show its performance in complex situations with partial observability. We discuss the application of the new score to real data and indicate how it can be modified to suit other neural data types.

摘要

我们提出了一种从多通道尖峰序列数据中学习定向信息流网络的新方法。一种新颖的评分函数——快照分数,用于评估潜在网络对数据的因果解释质量。此外,我们提出了一个合理性的通用概念,以便在部分可观测条件下评估网络学习技术。实例展示了用快照分数对网络进行评估,神经网络模拟显示了其在部分可观测的复杂情况下的性能。我们讨论了新分数在实际数据中的应用,并指出如何对其进行修改以适用于其他神经数据类型。

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