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酵母适应度的实验基因组学。

Experimental genomics of fitness in yeast.

机构信息

Biology Department, McGill University, 1205 Avenue Docteur Penfield, Montreal, Quebec, Canada.

出版信息

Proc Biol Sci. 2010 May 22;277(1687):1459-67. doi: 10.1098/rspb.2009.2099. Epub 2010 Feb 3.

Abstract

The set of single-gene deletions in yeast can be used to evaluate the effect of mutation on fitness over the whole genome. The measurement of growth in pure culture or relative growth in mixtures has confirmed that most deletions have little effect in laboratory culture. Moreover, there is a sharp distinction between lethality and a very mild impairment of growth, with very few intermediate cases. Different components of fitness, such as growth rate and yield, are positively correlated. Growth is also positively correlated across environments, although new conditions of growth usually identify a few conditionally impaired strains. Double mutants on average show alleviating epistasis, although a few per cent of combinations are synthetic lethal. The properties of the yeast deletion set provide us with the first genome-wide account of fitness, although transferring these conclusions to the field is a task for the future.

摘要

酵母中的一组单基因缺失可用于评估整个基因组中突变对适应性的影响。在纯培养或混合物中的相对生长的测量证实,大多数缺失在实验室培养中几乎没有影响。此外,致死性和生长的极轻微损伤之间存在明显的区别,很少有中间情况。适应性的不同组成部分,如增长率和产量,呈正相关。生长也与环境呈正相关,尽管新的生长条件通常会确定少数条件性受损的菌株。双突变体平均表现出缓解的上位性,尽管有少数组合是合成致死的。酵母缺失集的特性为我们提供了适应性的第一个全基因组描述,尽管将这些结论转移到实际领域是未来的任务。

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