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激动剂诱导的固有激活状态视紫红质激活的结构基础。

The structural basis of agonist-induced activation in constitutively active rhodopsin.

机构信息

Paul Scherrer Institut, 5232 Villigen PSI, Switzerland.

出版信息

Nature. 2011 Mar 31;471(7340):656-60. doi: 10.1038/nature09795. Epub 2011 Mar 9.

DOI:10.1038/nature09795
PMID:21389983
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3715716/
Abstract

G-protein-coupled receptors (GPCRs) comprise the largest family of membrane proteins in the human genome and mediate cellular responses to an extensive array of hormones, neurotransmitters and sensory stimuli. Although some crystal structures have been determined for GPCRs, most are for modified forms, showing little basal activity, and are bound to inverse agonists or antagonists. Consequently, these structures correspond to receptors in their inactive states. The visual pigment rhodopsin is the only GPCR for which structures exist that are thought to be in the active state. However, these structures are for the apoprotein, or opsin, form that does not contain the agonist all-trans retinal. Here we present a crystal structure at a resolution of 3 Å for the constitutively active rhodopsin mutant Glu 113 Gln in complex with a peptide derived from the carboxy terminus of the α-subunit of the G protein transducin. The protein is in an active conformation that retains retinal in the binding pocket after photoactivation. Comparison with the structure of ground-state rhodopsin suggests how translocation of the retinal β-ionone ring leads to a rotation of transmembrane helix 6, which is the critical conformational change on activation. A key feature of this conformational change is a reorganization of water-mediated hydrogen-bond networks between the retinal-binding pocket and three of the most conserved GPCR sequence motifs. We thus show how an agonist ligand can activate its GPCR.

摘要

G 蛋白偶联受体 (GPCRs) 是人类基因组中最大的膜蛋白家族,介导细胞对广泛的激素、神经递质和感觉刺激的反应。尽管已经确定了一些 GPCR 的晶体结构,但大多数都是经过修饰的形式,显示出很少的基础活性,并与反向激动剂或拮抗剂结合。因此,这些结构对应于非活性状态的受体。视觉色素视紫红质是唯一存在被认为处于活性状态的结构的 GPCR。然而,这些结构是针对无激动剂全反式视黄醛的无蛋白(或视蛋白)形式。在这里,我们展示了一个分辨率为 3 Å 的晶体结构,用于与来自 G 蛋白转导子 α 亚基羧基末端的肽结合的组成型活性视紫红质突变体 Glu113Gln。该蛋白处于活性构象,在光激活后保留视黄醛在结合口袋中。与基态视紫红质的结构比较表明,视黄醛 β-异戊二烯环的移位如何导致跨膜螺旋 6 的旋转,这是激活的关键构象变化。这种构象变化的一个关键特征是视网膜结合口袋和三个最保守的 GPCR 序列基序之间水介导氢键网络的重新组织。因此,我们展示了激动剂配体如何激活其 GPCR。

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本文引用的文献

1
Engineering G protein-coupled receptors to facilitate their structure determination.工程化改造G蛋白偶联受体以促进其结构测定。
Curr Opin Struct Biol. 2009 Aug;19(4):386-95. doi: 10.1016/j.sbi.2009.07.004. Epub 2009 Aug 12.
2
The structure and function of G-protein-coupled receptors.G蛋白偶联受体的结构与功能。
Nature. 2009 May 21;459(7245):356-63. doi: 10.1038/nature08144.
3
Location of the retinal chromophore in the activated state of rhodopsin*.视紫红质激活状态下视网膜发色团的位置*
J Biol Chem. 2009 Apr 10;284(15):10190-201. doi: 10.1074/jbc.M805725200. Epub 2009 Jan 28.
4
Crystal structure of opsin in its G-protein-interacting conformation.视蛋白处于与G蛋白相互作用构象时的晶体结构。
Nature. 2008 Sep 25;455(7212):497-502. doi: 10.1038/nature07330.
5
11-cis- and all-trans-retinols can activate rod opsin: rational design of the visual cycle.11-顺式视黄醇和全反式视黄醇均可激活视杆视蛋白:视觉循环的合理设计。
Biochemistry. 2008 Jul 15;47(28):7567-71. doi: 10.1021/bi800357b. Epub 2008 Jun 19.
6
Crystal structure of the ligand-free G-protein-coupled receptor opsin.无配体G蛋白偶联受体视蛋白的晶体结构。
Nature. 2008 Jul 10;454(7201):183-7. doi: 10.1038/nature07063. Epub 2008 Jun 18.
7
Functional role of the "ionic lock"--an interhelical hydrogen-bond network in family A heptahelical receptors.“A类七螺旋受体中螺旋间氢键网络‘离子锁’的功能作用”
J Mol Biol. 2008 Jul 18;380(4):648-55. doi: 10.1016/j.jmb.2008.05.022. Epub 2008 May 17.
8
Structural impact of the E113Q counterion mutation on the activation and deactivation pathways of the G protein-coupled receptor rhodopsin.E113Q反离子突变对G蛋白偶联受体视紫红质激活和失活途径的结构影响。
J Mol Biol. 2008 Jun 27;380(1):145-57. doi: 10.1016/j.jmb.2008.04.055. Epub 2008 Apr 30.
9
High-resolution distance mapping in rhodopsin reveals the pattern of helix movement due to activation.视紫红质中的高分辨率距离映射揭示了激活引起的螺旋运动模式。
Proc Natl Acad Sci U S A. 2008 May 27;105(21):7439-44. doi: 10.1073/pnas.0802515105. Epub 2008 May 19.
10
Crystal structure of squid rhodopsin.鱿鱼视紫红质的晶体结构。
Nature. 2008 May 15;453(7193):363-7. doi: 10.1038/nature06925.