Mathieson Iain, Lazaridis Iosif, Rohland Nadin, Mallick Swapan, Patterson Nick, Roodenberg Songül Alpaslan, Harney Eadaoin, Stewardson Kristin, Fernandes Daniel, Novak Mario, Sirak Kendra, Gamba Cristina, Jones Eppie R, Llamas Bastien, Dryomov Stanislav, Pickrell Joseph, Arsuaga Juan Luís, de Castro José María Bermúdez, Carbonell Eudald, Gerritsen Fokke, Khokhlov Aleksandr, Kuznetsov Pavel, Lozano Marina, Meller Harald, Mochalov Oleg, Moiseyev Vyacheslav, Guerra Manuel A Rojo, Roodenberg Jacob, Vergès Josep Maria, Krause Johannes, Cooper Alan, Alt Kurt W, Brown Dorcas, Anthony David, Lalueza-Fox Carles, Haak Wolfgang, Pinhasi Ron, Reich David
Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115, USA.
Broad Institute of MIT and Harvard, Cambridge, Massachusetts 02142, USA.
Nature. 2015 Dec 24;528(7583):499-503. doi: 10.1038/nature16152. Epub 2015 Nov 23.
Ancient DNA makes it possible to observe natural selection directly by analysing samples from populations before, during and after adaptation events. Here we report a genome-wide scan for selection using ancient DNA, capitalizing on the largest ancient DNA data set yet assembled: 230 West Eurasians who lived between 6500 and 300 bc, including 163 with newly reported data. The new samples include, to our knowledge, the first genome-wide ancient DNA from Anatolian Neolithic farmers, whose genetic material we obtained by extracting from petrous bones, and who we show were members of the population that was the source of Europe's first farmers. We also report a transect of the steppe region in Samara between 5600 and 300 bc, which allows us to identify admixture into the steppe from at least two external sources. We detect selection at loci associated with diet, pigmentation and immunity, and two independent episodes of selection on height.
通过分析适应事件发生之前、期间和之后的群体样本,古DNA使得直接观察自然选择成为可能。在此,我们利用迄今组装的最大古DNA数据集,报告一项使用古DNA进行的全基因组选择扫描:230名生活在公元前6500年至300年之间的西欧亚人,其中163名拥有新报告的数据。据我们所知,新样本包括来自安纳托利亚新石器时代农民的首个全基因组古DNA,我们从岩骨中提取了他们的遗传物质,并且我们表明他们是欧洲首批农民的来源群体的成员。我们还报告了公元前5600年至300年之间萨马拉草原地区的一个横断面,这使我们能够确定至少有两个外部来源混入草原。我们在与饮食、色素沉着和免疫相关的基因座上检测到选择,以及对身高的两次独立选择事件。