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EpiModel: An R Package for Mathematical Modeling of Infectious Disease over Networks.

作者信息

Jenness Samuel M, Goodreau Steven M, Morris Martina

机构信息

Emory University.

University of Washington.

出版信息

J Stat Softw. 2018 Apr;84. doi: 10.18637/jss.v084.i08. Epub 2018 Apr 20.


DOI:10.18637/jss.v084.i08
PMID:29731699
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5931789/
Abstract

Package provides tools for building, simulating, and analyzing mathematical models for the population dynamics of infectious disease transmission in R. Several classes of models are included, but the unique contribution of this software package is a general stochastic framework for modeling the spread of epidemics on networks. integrates recent advances in statistical methods for network analysis (temporal exponential random graph models) that allow the epidemic modeling to be grounded in empirical data on contacts that can spread infection. This article provides an overview of both the modeling tools built into , designed to facilitate learning for students new to modeling, and the application programming interface for extending package , designed to facilitate the exploration of novel research questions for advanced modelers.

摘要

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本文引用的文献

[1]
INFERENCE FOR SOCIAL NETWORK MODELS FROM EGOCENTRICALLY SAMPLED DATA, WITH APPLICATION TO UNDERSTANDING PERSISTENT RACIAL DISPARITIES IN HIV PREVALENCE IN THE US.

Ann Appl Stat. 2017-3

[2]
Impact of the Centers for Disease Control's HIV Preexposure Prophylaxis Guidelines for Men Who Have Sex With Men in the United States.

J Infect Dis. 2016-12-15

[3]
Effectiveness of combination packages for HIV-1 prevention in sub-Saharan Africa depends on partnership network structure: a mathematical modelling study.

Sex Transm Infect. 2016-12

[4]
Mechanistic Models of Infectious Disease and Their Impact on Public Health.

Am J Epidemiol. 2016-3-1

[5]
On the Question of Effective Sample Size in Network Modeling: An Asymptotic Inquiry.

Stat Sci. 2015-5-1

[6]
An approximation method for improving dynamic network model fitting.

J Comput Graph Stat. 2015

[7]
A stochastic agent-based model of pathogen propagation in dynamic multi-relational social networks.

Simulation. 2014-4-1

[8]
SI infection on a dynamic partnership network: characterization of R0.

J Math Biol. 2015-7

[9]
A Separable Model for Dynamic Networks.

J R Stat Soc Series B Stat Methodol. 2014-1-1

[10]
What drives the US and Peruvian HIV epidemics in men who have sex with men (MSM)?

PLoS One. 2012-11-29

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