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IEEE Trans Radiat Plasma Med Sci. 2019 Mar;3(2):232-241. doi: 10.1109/TRPMS.2018.2832609. Epub 2018 May 2.
2
Unraveling biophysical interactions of radiation pneumonitis in non-small-cell lung cancer via Bayesian network analysis.通过贝叶斯网络分析揭示非小细胞肺癌放射性肺炎的生物物理相互作用
Radiother Oncol. 2017 Apr;123(1):85-92. doi: 10.1016/j.radonc.2017.02.004. Epub 2017 Feb 22.
3
Targeting microRNAs as key modulators of tumor immune response.将微小RNA作为肿瘤免疫反应的关键调节因子进行靶向治疗。
J Exp Clin Cancer Res. 2016 Jun 27;35:103. doi: 10.1186/s13046-016-0375-2.
4
Development of a prediction model for radiosensitivity using the expression values of genes and long non-coding RNAs.利用基因和长链非编码RNA的表达值开发放射敏感性预测模型。
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5
Respiration-Averaged CT for Attenuation Correction of PET Images - Impact on PET Texture Features in Non-Small Cell Lung Cancer Patients.用于PET图像衰减校正的呼吸平均CT——对非小细胞肺癌患者PET纹理特征的影响
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A Validated Prediction Model for Overall Survival From Stage III Non-Small Cell Lung Cancer: Toward Survival Prediction for Individual Patients.一种用于Ⅲ期非小细胞肺癌总生存期的验证预测模型:迈向个体患者的生存预测
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Non-coding RNAs in lung cancer.肺癌中的非编码RNA
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Transparent Reporting of a Multivariable Prediction Model for Individual Prognosis or Diagnosis (TRIPOD): The TRIPOD Statement.透明报告个体预后或诊断的多变量预测模型(TRIPOD):TRIPOD 声明。
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一种用于非小细胞肺癌(NSCLC)中肿瘤局部控制和放射性肺炎联合预测的多目标贝叶斯网络方法,以实现适应性放疗。

A multiobjective Bayesian networks approach for joint prediction of tumor local control and radiation pneumonitis in nonsmall-cell lung cancer (NSCLC) for response-adapted radiotherapy.

作者信息

Luo Yi, McShan Daniel L, Matuszak Martha M, Ray Dipankar, Lawrence Theodore S, Jolly Shruti, Kong Feng-Ming, Ten Haken Randall K, El Naqa Issam

机构信息

Department of Radiation Oncology, The University of Michigan, Ann Arbor, MI, 48103, USA.

Department of Radiation Oncology, Indiana University, Indianapolis, IN, 46202, USA.

出版信息

Med Phys. 2018 Jun 4. doi: 10.1002/mp.13029.

DOI:10.1002/mp.13029
PMID:29862533
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6279602/
Abstract

PURPOSE

Individualization of therapeutic outcomes in NSCLC radiotherapy is likely to be compromised by the lack of proper balance of biophysical factors affecting both tumor local control (LC) and side effects such as radiation pneumonitis (RP), which are likely to be intertwined. Here, we compare the performance of separate and joint outcomes predictions for response-adapted personalized treatment planning.

METHODS

A total of 118 NSCLC patients treated on prospective protocols with 32 cases of local progression and 20 cases of RP grade 2 or higher (RP2) were studied. Sixty-eight patients with 297 features before and during radiotherapy were used for discovery and 50 patients were reserved for independent testing. A multiobjective Bayesian network (MO-BN) approach was developed to identify important features for joint LC/RP2 prediction using extended Markov blankets as inputs to develop a BN predictive structure. Cross-validation (CV) was used to guide the MO-BN structure learning. Area under the free-response receiver operating characteristic (AU-FROC) curve was used to evaluate joint prediction performance.

RESULTS

Important features including single nucleotide polymorphisms (SNPs), micro RNAs, pretreatment cytokines, pretreatment PET radiomics together with lung and tumor gEUDs were selected and their biophysical inter-relationships with radiation outcomes (LC and RP2) were identified in a pretreatment MO-BN. The joint LC/RP2 prediction yielded an AU-FROC of 0.80 (95% CI: 0.70-0.86) upon internal CV. This improved to 0.85 (0.75-0.91) with additional two SNPs, changes in one cytokine and two radiomics PET image features through the course of radiotherapy in a during-treatment MO-BN. This MO-BN model outperformed combined single-objective Bayesian networks (SO-BNs) during-treatment [0.78 (0.67-0.84)]. AU-FROC values in the evaluation of the MO-BN and individual SO-BNs on the testing dataset were 0.77 and 0.68 for pretreatment, and 0.79 and 0.71 for during-treatment, respectively.

CONCLUSIONS

MO-BNs can reveal possible biophysical cross-talks between competing radiotherapy clinical endpoints. The prediction is improved by providing additional during-treatment information. The developed MO-BNs can be an important component of decision support systems for personalized response-adapted radiotherapy.

摘要

目的

非小细胞肺癌(NSCLC)放疗中治疗结果的个体化可能因影响肿瘤局部控制(LC)和放射性肺炎(RP)等副作用的生物物理因素缺乏适当平衡而受到影响,而这些因素可能相互交织。在此,我们比较了用于适应性个性化治疗计划的单独和联合结果预测的性能。

方法

对118例接受前瞻性方案治疗的NSCLC患者进行研究,其中32例出现局部进展,20例发生2级或更高等级的RP(RP2)。68例放疗前和放疗期间具有297个特征的患者用于探索,50例患者留作独立测试。开发了一种多目标贝叶斯网络(MO-BN)方法,以扩展马尔可夫覆盖作为输入来识别用于联合LC/RP2预测的重要特征,从而构建BN预测结构。交叉验证(CV)用于指导MO-BN结构学习。自由反应接收者操作特征(AU-FROC)曲线下面积用于评估联合预测性能。

结果

在治疗前的MO-BN中,选择了包括单核苷酸多态性(SNP)、微小RNA、治疗前细胞因子、治疗前PET影像组学以及肺和肿瘤广义等效均匀剂量(gEUD)等重要特征,并确定了它们与放疗结果(LC和RP2)之间的生物物理相互关系。内部交叉验证时,联合LC/RP2预测的AU-FROC为0.80(95%CI:0.70-0.86)。在治疗期间的MO-BN中,通过放疗过程中增加另外两个SNP、一种细胞因子的变化和两个PET影像组学图像特征,这一结果提高到了0.85(0.75-0.91)。该MO-BN模型在治疗期间优于组合的单目标贝叶斯网络(SO-BN)[0.78(0.67-0.84)]。在测试数据集上评估MO-BN和单个SO-BN时,治疗前的AU-FROC值分别为0.77和0.68,治疗期间分别为0.79和0.71。

结论

MO-BN可以揭示竞争性放疗临床终点之间可能的生物物理相互作用。通过提供额外的治疗期间信息可改善预测。所开发的MO-BN可以成为适应性个性化放疗决策支持系统的重要组成部分。