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茉莉酸甲酯诱导下 L. 转录组分析及其对 JA 信号转导、转录因子和单萜生物合成途径的响应

Transcriptome Analysis of JA Signal Transduction, Transcription Factors, and Monoterpene Biosynthesis Pathway in Response to Methyl Jasmonate Elicitation in L.

机构信息

Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China.

Jiangsu Key Laboratory for the Research and Utilization of Plant Resources, Nanjing 210014, China.

出版信息

Int J Mol Sci. 2018 Aug 10;19(8):2364. doi: 10.3390/ijms19082364.

Abstract

L. has important economic value for its abundance in essential oils. Menthol is the main component of essential oils, which is certainly the best-known monoterpene for its simple structure and wide applications. However, the regulation of menthol biosynthesis remains elusive in . In this study, transcriptome sequencing of with MeJA treatment was applied to illustrate the transcriptional regulation of plant secondary metabolites, especially menthol biosynthesis. Six sequencing libraries were constructed including three replicates for both control check (CK) and methyl jasmonate (MeJA) treatment and at least 8 Gb clean bases was produced for each library. After assembly, a total of 81,843 unigenes were obtained with an average length of 724 bp. Functional annotation indicated that 64.55% of unigenes could be annotated in at least one database. Additionally, 4430 differentially expressed genes (DEGs) with 2383 up-regulated and 2047 down-regulated transcripts were identified under MeJA treatment. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment indicated that "Monoterpenoid biosynthesis" was one of the most significantly enriched pathways in metabolism. Subsequently, DEGs involved in JA signal transduction, transcription factors, and monoterpene biosynthesis were analyzed. 9 orthologous genes involved in menthol biosynthesis were also identified. This is the first report of a transcriptome study of and will facilitate the studies of monoterpene biosynthesis in the genus .

摘要

因其富含精油,[植物名称]具有重要的经济价值。薄荷醇是精油的主要成分,由于其结构简单、应用广泛,是最广为人知的单萜类化合物。然而,薄荷醇生物合成的调控机制在[植物名称]中仍难以捉摸。在这项研究中,应用[植物名称]经 MeJA 处理的转录组测序来阐明植物次生代谢物,特别是薄荷醇生物合成的转录调控。构建了六个测序文库,每个文库包括三个对照(CK)和甲基茉莉酸(MeJA)处理的重复,每个文库至少产生 8 Gb 清洁碱基。组装后,共获得 81843 条 unigenes,平均长度为 724bp。功能注释表明,64.55%的 unigenes至少可以在一个数据库中注释。此外,在 MeJA 处理下鉴定出 4430 个差异表达基因(DEGs),其中 2383 个上调,2047 个下调。京都基因与基因组百科全书(KEGG)富集表明,“单萜类生物合成”是代谢途径中最显著富集的途径之一。随后,分析了参与 JA 信号转导、转录因子和单萜生物合成的 DEGs。还鉴定了 9 个与薄荷醇生物合成相关的同源基因。这是对[植物名称]转录组研究的首次报道,将有助于该属中单萜生物合成的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e74c/6121529/151a6d4d7446/ijms-19-02364-g001.jpg

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