Department of Computer Science and Engineering, NIT Goa, Ponda, India.
Department of Radiology, A.O.U. Cagliari, Cagliari, Italy.
Med Biol Eng Comput. 2019 Feb;57(2):543-564. doi: 10.1007/s11517-018-1897-x. Epub 2018 Sep 26.
Manual ultrasound (US)-based methods are adapted for lumen diameter (LD) measurement to estimate the risk of stroke but they are tedious, error prone, and subjective causing variability. We propose an automated deep learning (DL)-based system for lumen detection. The system consists of a combination of two DL systems: encoder and decoder for lumen segmentation. The encoder employs a 13-layer convolution neural network model (CNN) for rich feature extraction. The decoder employs three up-sample layers of fully convolution network (FCN) for lumen segmentation. Three sets of manual tracings were used during the training paradigm leading to the design of three DL systems. Cross-validation protocol was implemented for all three DL systems. Using the polyline distance metric, the precision of merit for three DL systems over 407 US scans was 99.61%, 97.75%, and 99.89%, respectively. The Jaccard index and Dice similarity of DL lumen segmented region against three ground truth (GT) regions were 0.94, 0.94, and 0.93 and 0.97, 0.97, and 0.97, respectively. The corresponding AUC for three DL systems was 0.95, 0.91, and 0.93. The experimental results demonstrated superior performance of proposed deep learning system over conventional methods in literature. Graphical abstract ᅟ.
手动超声(US)方法适用于管腔直径(LD)测量,以估计中风风险,但它们繁琐、容易出错且主观,导致变异性。我们提出了一种用于管腔检测的自动化深度学习(DL)系统。该系统由两个 DL 系统的组合组成:用于管腔分割的编码器和解码器。编码器采用 13 层卷积神经网络模型(CNN)进行丰富的特征提取。解码器采用三层全卷积网络(FCN)上采样层进行管腔分割。在训练范例期间使用了三组手动跟踪,从而设计了三个 DL 系统。对所有三个 DL 系统都实施了交叉验证协议。使用折线距离度量,三个 DL 系统在 407 次 US 扫描上的精度分别为 99.61%、97.75%和 99.89%。DL 管腔分割区域与三个地面实况(GT)区域的 Jaccard 指数和 Dice 相似性分别为 0.94、0.94 和 0.93,以及 0.97、0.97 和 0.97。三个 DL 系统的相应 AUC 分别为 0.95、0.91 和 0.93。实验结果表明,所提出的深度学习系统在文献中的性能优于传统方法。