School of Life Sciences, Shandong Province Key Laboratory of Applied Mycology, and Qingdao International Center on Microbes Utilizing Biogas, Qingdao Agricultural University, Qingdao, Shandong Province, China.
College of Chemistry and Pharmacy, Qingdao Agricultural University, Qingdao, Shandong Province, China.
Appl Environ Microbiol. 2019 Jul 1;85(14). doi: 10.1128/AEM.00293-19. Print 2019 Jul 15.
and , human-pathogenic fungi found worldwide, are receiving increasing attention due to high morbidity and mortality in immunocompromised patients. In the present work, 110 fungus pairs were constructed by coculturing 16 wood-decaying basidiomycetes, among which coculture of Murr and was found to strongly inhibit pathogenic fungi through bioactivity-guided assays. A combination of metabolomics and molecular network analysis revealed that 44 features were either newly synthesized or produced at high levels in this coculture system and that 6 of the features that belonged to a family of novel and unusual linear sesterterpenes contributed to high activity with MICs of 1 to 32 μg/ml against pathogenic fungi. Furthermore, dynamic C-labeling analysis revealed an association between induced features and the corresponding fungi. Unusual sesterterpenes were C labeled only in in a time course after stimulation by the coculture, suggesting that these sesterterpenes were synthesized by instead of Murr. Sesterterpene compounds 1 to 3 were renamed postrediene A to C. Real-time reverse transcription-quantitative PCR (RT-qPCR) analysis revealed that transcriptional levels of three genes encoding terpene synthase, farnesyl-diphosphate farnesyltransferase, and oxidase were found to be 8.2-fold, 88.7-fold, and 21.6-fold higher, respectively, in the coculture than in the monoculture, indicating that biosynthetic gene cluster 10 was most likely responsible for the synthesis of these sesterterpenes. A putative biosynthetic pathway of postrediene A to postrediene C was then proposed based on structures of sesterterpenes and molecular network analysis. A number of gene clusters involved in biosynthesis of secondary metabolites are presumably silent or expressed at low levels under conditions of standard laboratory cultivation, resulting in a large gap between the pool of discovered metabolites and genome capability. This work mimicked naturally occurring competition by construction of an artificial coculture of basidiomycete fungi for the identification of secondary metabolites with novel scaffolds and excellent bioactivity. Unusual linear sesterterpenes of postrediene A to C synthesized by not only were promising lead drugs against human-pathogenic fungi but also highlighted a distinct pathway for sesterterpene biosynthesis in basidiomycetes. The current work provides an important basis for uncovering novel gene functions involved in sesterterpene synthesis and for gaining insights into the mechanism of silent gene activation in fungal defense.
以及在全球范围内发现的人类致病性真菌,由于免疫功能低下患者的发病率和死亡率较高,因此受到越来越多的关注。在本工作中,通过共培养 16 种木质腐朽担子菌构建了 110 对真菌对,发现共培养 Murr 和 强烈抑制了致病性真菌的生物活性导向测定。代谢组学和分子网络分析的组合表明,在这种共培养系统中,有 44 种特征要么是新合成的,要么是以高产量产生的,而属于新型和不寻常线性倍半萜类家族的 6 种特征对致病性真菌具有高活性,MIC 为 1 至 32μg/ml。此外,动态 C 标记分析揭示了诱导特征与相应真菌之间的关联。在受到共培养刺激后的时间过程中,仅在 中标记了不寻常的倍半萜,表明这些倍半萜是由 而不是 Murr 合成的。倍半萜化合物 1 至 3 分别被重新命名为 postrediene A 至 C。实时逆转录定量 PCR(RT-qPCR)分析表明,在共培养中,编码萜烯合酶、法呢基二磷酸法呢基转移酶和氧化酶的三个基因的转录水平分别比单培养高 8.2 倍、88.7 倍和 21.6 倍,表明生物合成基因簇 10 很可能负责这些倍半萜的合成。然后根据倍半萜的结构和分子网络分析提出了 postrediene A 到 postrediene C 的假定生物合成途径。在标准实验室培养条件下,许多参与次生代谢物生物合成的基因簇可能处于沉默或低表达状态,导致发现的代谢物库与基因组能力之间存在很大差距。通过构建担子菌真菌的人工共培养来模拟自然发生的竞争,从而鉴定具有新型支架和优异生物活性的次生代谢物,本工作为此提供了依据。 由 合成的不寻常线性倍半萜 postrediene A 至 C 不仅是有前途的抗人类致病性真菌的先导药物,而且突出了担子菌中倍半萜生物合成的独特途径。目前的工作为揭示参与倍半萜合成的新基因功能以及深入了解真菌防御中沉默基因激活的机制提供了重要依据。