• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于生长模式的胎儿皮质表面图谱分割。

Fetal cortical surface atlas parcellation based on growth patterns.

机构信息

Department of Computer Science and Technology, Shandong University, Shandong, China.

Department of Radiology and BRIC, University of North Carolina at Chapel Hill, Chapel Hills, North Carolina.

出版信息

Hum Brain Mapp. 2019 Sep;40(13):3881-3899. doi: 10.1002/hbm.24637. Epub 2019 May 20.

DOI:10.1002/hbm.24637
PMID:31106942
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6865595/
Abstract

Defining anatomically and functionally meaningful parcellation maps on cortical surface atlases is of great importance in surface-based neuroimaging analysis. The conventional cortical parcellation maps are typically defined based on anatomical cortical folding landmarks in adult surface atlases. However, they are not suitable for fetal brain studies, due to dramatic differences in brain size, shape, and properties between adults and fetuses. To address this issue, we propose a novel data-driven method for parcellation of fetal cortical surface atlases into distinct regions based on the dynamic "growth patterns" of cortical properties (e.g., surface area) from a population of fetuses. Our motivation is that the growth patterns of cortical properties indicate the underlying rapid changes of microstructures, which determine the molecular and functional principles of the cortex. Thus, growth patterns are well suitable for defining distinct cortical regions in development, structure, and function. To comprehensively capture the similarities of cortical growth patterns among vertices, we construct two complementary similarity matrices. One is directly based on the growth trajectories of vertices, and the other is based on the correlation profiles of vertices' growth trajectories in relation to a set of reference points. Then, we nonlinearly fuse these two similarity matrices into a single one, which can better capture both their common and complementary information than by simply averaging them. Finally, based on this fused similarity matrix, we perform spectral clustering to divide the fetal cortical surface atlases into distinct regions. By applying our method on 25 normal fetuses from 26 to 29 gestational weeks, we construct age-specific fetal cortical surface atlases equipped with biologically meaningful parcellation maps based on cortical growth patterns. Importantly, our generated parcellation maps reveal spatially contiguous, hierarchical and bilaterally relatively symmetric patterns of fetal cortical surface development.

摘要

在基于表面的神经影像学分析中,在皮质表面图谱上定义具有解剖学和功能意义的分区图非常重要。传统的皮质分区图通常是基于成人表面图谱中的解剖学皮质折叠标志定义的。然而,它们不适合用于胎儿大脑研究,因为成人和胎儿的大脑大小、形状和性质存在巨大差异。为了解决这个问题,我们提出了一种新的基于群体的方法,用于根据皮质属性(例如表面积)的动态“生长模式”将胎儿皮质表面图谱划分为不同的区域。我们的动机是,皮质属性的生长模式表明了微观结构的快速变化,而微观结构决定了皮质的分子和功能原理。因此,生长模式非常适合定义发育、结构和功能中的不同皮质区域。为了全面捕捉顶点之间皮质生长模式的相似性,我们构建了两个互补的相似性矩阵。一个直接基于顶点的生长轨迹,另一个基于顶点生长轨迹与一组参考点之间的相关轮廓。然后,我们将这两个相似性矩阵非线性地融合成一个单一的矩阵,这比简单地平均它们可以更好地捕捉它们的共同和互补信息。最后,基于这个融合的相似性矩阵,我们进行谱聚类,将胎儿皮质表面图谱划分为不同的区域。通过将我们的方法应用于 26 至 29 孕周的 25 个正常胎儿,我们构建了基于皮质生长模式的具有生物学意义的分区图的特定年龄的胎儿皮质表面图谱。重要的是,我们生成的分区图揭示了胎儿皮质表面发育的空间连续、层次和双侧相对对称的模式。

相似文献

1
Fetal cortical surface atlas parcellation based on growth patterns.基于生长模式的胎儿皮质表面图谱分割。
Hum Brain Mapp. 2019 Sep;40(13):3881-3899. doi: 10.1002/hbm.24637. Epub 2019 May 20.
2
FETAL CORTICAL PARCELLATION BASED ON GROWTH PATTERNS.基于生长模式的胎儿皮质分区
Proc IEEE Int Symp Biomed Imaging. 2018 Apr;2018:696-699. doi: 10.1109/ISBI.2018.8363669. Epub 2018 May 24.
3
Parcellation of Infant Surface Atlas Using Developmental Trajectories of Multidimensional Cortical Attributes.利用多维皮质属性的发育轨迹对婴儿表面图谱进行分割
Med Image Comput Comput Assist Interv. 2015 Oct;9351:543-550. doi: 10.1007/978-3-319-24574-4_65. Epub 2015 Nov 18.
4
Construction of 4D infant cortical surface atlases with sharp folding patterns via spherical patch-based group-wise sparse representation.基于球面补丁的组稀疏表示构建具有锐利折叠模式的 4D 婴儿皮质表面图谱。
Hum Brain Mapp. 2019 Sep;40(13):3860-3880. doi: 10.1002/hbm.24636. Epub 2019 May 21.
5
CHARTING DEVELOPMENT-BASED JOINT PARCELLATION MAPS OF HUMAN AND MACAQUE BRAINS DURING INFANCY.绘制人类和猕猴大脑婴儿期基于发育的联合分割图谱
Proc IEEE Int Symp Biomed Imaging. 2019 Apr;2019:422-425. doi: 10.1109/ISBI.2019.8759379. Epub 2019 Jul 11.
6
Constructing 4D infant cortical surface atlases based on dynamic developmental trajectories of the cortex.基于皮质动态发育轨迹构建4D婴儿皮质表面图谱。
Med Image Comput Comput Assist Interv. 2014;17(Pt 3):89-96. doi: 10.1007/978-3-319-10443-0_12.
7
Automatic labeling of cortical sulci for the human fetal brain based on spatio-temporal information of gyrification.基于脑回时空信息的胎儿大脑皮质脑沟自动标记
Neuroimage. 2019 Mar;188:473-482. doi: 10.1016/j.neuroimage.2018.12.023. Epub 2018 Dec 12.
8
A human brain atlas derived via n-cut parcellation of resting-state and task-based fMRI data.通过对静息态和任务态功能磁共振成像数据进行n割法分割得出的人类脑图谱。
Magn Reson Imaging. 2016 Feb;34(2):209-18. doi: 10.1016/j.mri.2015.10.036. Epub 2015 Oct 31.
9
Construction of 4D high-definition cortical surface atlases of infants: Methods and applications.婴儿4D高清皮质表面图谱的构建:方法与应用
Med Image Anal. 2015 Oct;25(1):22-36. doi: 10.1016/j.media.2015.04.005. Epub 2015 Apr 17.
10
Mapping Genetic Topography of Cortical Thickness and Surface Area in Neonatal Brains.绘制新生儿大脑皮质厚度和表面积的遗传地形图谱。
J Neurosci. 2023 Aug 23;43(34):6010-6020. doi: 10.1523/JNEUROSCI.1841-22.2023. Epub 2023 Jun 27.

引用本文的文献

1
Advances in magnetic resonance imaging of the developing brain and its applications in pediatrics.发育中大脑的磁共振成像进展及其在儿科学中的应用。
World J Pediatr. 2025 May 30. doi: 10.1007/s12519-025-00905-7.
2
GEOMETRIC CONSTRAINED DEEP LEARNING FOR MOTION CORRECTION OF FETAL BRAIN MR IMAGES.用于胎儿脑磁共振图像运动校正的几何约束深度学习
Proc IEEE Int Symp Biomed Imaging. 2023 Apr;2023. doi: 10.1109/isbi53787.2023.10230423. Epub 2023 Sep 1.
3
Surface Expansion Regionalization of the Hippocampus in Early Brain Development.早期脑发育中海马体的表面扩展区域划分
bioRxiv. 2025 Feb 24:2025.02.22.639699. doi: 10.1101/2025.02.22.639699.
4
Molecular signatures of cortical expansion in the human foetal brain.人类胎儿大脑皮层扩张的分子特征。
Nat Commun. 2024 Nov 8;15(1):9685. doi: 10.1038/s41467-024-54034-2.
5
Automatic cortical surface parcellation in the fetal brain using attention-gated spherical U-net.使用注意力门控球形U型网络对胎儿大脑进行自动皮质表面分割。
Front Neurosci. 2024 May 30;18:1410936. doi: 10.3389/fnins.2024.1410936. eCollection 2024.
6
Fetal brain MRI atlases and datasets: A review.胎儿脑 MRI 图谱和数据集:综述。
Neuroimage. 2024 Apr 15;292:120603. doi: 10.1016/j.neuroimage.2024.120603. Epub 2024 Apr 6.
7
Molecular signatures of cortical expansion in the human fetal brain.人类胎儿大脑皮质扩张的分子特征
bioRxiv. 2024 Feb 13:2024.02.13.580198. doi: 10.1101/2024.02.13.580198.
8
MRI-based structural covariance network in early human brain development.基于磁共振成像的早期人类大脑发育结构协方差网络
Front Neurosci. 2023 Nov 1;17:1302069. doi: 10.3389/fnins.2023.1302069. eCollection 2023.
9
Longitudinal mapping of the development of cortical thickness and surface area in rhesus macaques during the first three years.恒河猴大脑皮质厚度和表面积在出生后三年的纵向发育图谱
Proc Natl Acad Sci U S A. 2023 Aug 8;120(32):e2303313120. doi: 10.1073/pnas.2303313120. Epub 2023 Jul 31.
10
Mapping Genetic Topography of Cortical Thickness and Surface Area in Neonatal Brains.绘制新生儿大脑皮质厚度和表面积的遗传地形图谱。
J Neurosci. 2023 Aug 23;43(34):6010-6020. doi: 10.1523/JNEUROSCI.1841-22.2023. Epub 2023 Jun 27.

本文引用的文献

1
A computational method for longitudinal mapping of orientation-specific expansion of cortical surface in infants.一种用于婴儿皮质表面方向特异性扩张的纵向映射的计算方法。
Med Image Anal. 2018 Oct;49:46-59. doi: 10.1016/j.media.2018.07.006. Epub 2018 Jul 21.
2
SPANOL (SPectral ANalysis of Lobes): A Spectral Clustering Framework for Individual and Group Parcellation of Cortical Surfaces in Lobes.SPANOL(脑叶频谱分析):一种用于脑叶皮质表面个体和群体分割的频谱聚类框架。
Front Neurosci. 2018 May 31;12:354. doi: 10.3389/fnins.2018.00354. eCollection 2018.
3
Discovering cortical sulcal folding patterns in neonates using large-scale dataset.利用大规模数据集发现新生儿大脑皮层脑沟折叠模式。
Hum Brain Mapp. 2018 Sep;39(9):3625-3635. doi: 10.1002/hbm.24199. Epub 2018 Apr 26.
4
Computational neuroanatomy of baby brains: A review.婴儿大脑的计算神经解剖学:综述。
Neuroimage. 2019 Jan 15;185:906-925. doi: 10.1016/j.neuroimage.2018.03.042. Epub 2018 Mar 21.
5
The dynamics of cortical folding waves and prematurity-related deviations revealed by spatial and spectral analysis of gyrification.皮质折叠波的动力学和回旋波空间与频谱分析揭示的与早产相关的偏差。
Neuroimage. 2019 Jan 15;185:934-946. doi: 10.1016/j.neuroimage.2018.03.005. Epub 2018 Mar 6.
6
Dynamic patterns of cortical expansion during folding of the preterm human brain.人类早产儿大脑折叠过程中皮质扩张的动态模式。
Proc Natl Acad Sci U S A. 2018 Mar 20;115(12):3156-3161. doi: 10.1073/pnas.1715451115. Epub 2018 Mar 5.
7
Exploring Gyral Patterns of Infant Cortical Folding based on Multi-view Curvature Information.基于多视图曲率信息探索婴儿皮质折叠的脑回模式。
Med Image Comput Comput Assist Interv. 2017 Sep;10433:12-20. doi: 10.1007/978-3-319-66182-7_2. Epub 2017 Sep 4.
8
A normative spatiotemporal MRI atlas of the fetal brain for automatic segmentation and analysis of early brain growth.胎儿大脑的规范时空 MRI 图谱,用于自动分割和分析早期脑发育。
Sci Rep. 2017 Mar 28;7(1):476. doi: 10.1038/s41598-017-00525-w.
9
Learning-Based Topological Correction for Infant Cortical Surfaces.基于学习的婴儿皮质表面拓扑校正
Med Image Comput Comput Assist Interv. 2016 Oct;9900:219-227. doi: 10.1007/978-3-319-46720-7_26. Epub 2016 Oct 2.
10
Toward the automatic quantification of in utero brain development in 3D structural MRI: A review.迈向三维结构磁共振成像中子宫内脑发育的自动量化:综述
Hum Brain Mapp. 2017 May;38(5):2772-2787. doi: 10.1002/hbm.23536. Epub 2017 Feb 14.