Institut de Chimie de Nice, UMR 7272, Université Côte D'Azur, CNRS, 06108, Nice, France.
Laboratoire BVPAM, FRE CNRS INEE, Université de Lyon, Université Jean Monnet, 3727 - EA 3061, 23 rue du Dr Paul Michelon, 42000, Saint-Étienne, France.
Metabolomics. 2020 Feb 26;16(3):31. doi: 10.1007/s11306-020-01654-6.
Fine lavender and lavandin are perfume and medicinal plants originate from the South of France and are widely cultivated for their essential oils. Recently, cultivated plants suffered from a severe decline in France, due to the propagation of the yellow decline disease. This disease is caused by the stolbur phytoplasma, a bacterium transmitted by a sap-sucking insect, the planthopper.
In order to understand the complex relationships between host plant, pest, pathogen and environment responsible for the yellow decline of lavender, we use a metabolomic approach to highlight changes in chemical emissions from asymptomatic ("healthy") and symptomatic ("infected") plants.
Volatile compounds produced by fine lavender and lavandin were collected in the field using a dynamic headspace extraction approach. Afterwards, compounds trapped on Tenax adsorbent were thermodesorbed and analysed using an automated thermal desorption-gas chromatography-mass spectrometry (ATD-GC-MS). Multivariate statistical analyses was performed using principal component analysis and partial least square discriminant analyses.
The untargeted screening of volatiles allowed the separation of asymptomatic and symptomatic plants according to their emissions. The approach was sufficiently accurate so as to separate the emissions according to the different stages of infection. Twelve compounds were found to be deregulated metabolites of yellow disease infection, common to fine lavender (variety 7713) and lavandin (variety abrial).
The metabolomic approach allowed for the effective identification of chemical variations between infected and healthy plants in a complex field environment.
熏衣草和拉文达是源自法国南部的香水和药用植物,因其精油而被广泛种植。最近,由于黄萎病的传播,法国的栽培植物遭受了严重的衰退。这种疾病是由韧皮部植原体引起的,韧皮部植原体是一种由吸食汁液的昆虫(叶蝉)传播的细菌。
为了了解导致薰衣草黄萎病的寄主植物、害虫、病原体和环境之间的复杂关系,我们使用代谢组学方法来突出无症状(“健康”)和有症状(“感染”)植物的化学排放变化。
使用动态顶空提取方法在田间收集熏衣草和拉文达产生的挥发性化合物。然后,将Tenax 吸附剂上捕获的化合物热解吸并用自动热解吸-气相色谱-质谱联用仪(ATD-GC-MS)分析。使用主成分分析和偏最小二乘判别分析进行多变量统计分析。
非靶向筛选挥发性化合物可以根据其排放物将无症状和有症状的植物分开。该方法足够准确,可以根据感染的不同阶段来分离排放物。发现有 12 种化合物是黄萎病感染的下调代谢物,对熏衣草(品种 7713)和拉文达(品种 abrial)都有影响。
代谢组学方法能够有效地识别复杂田间环境中感染和健康植物之间的化学变化。