Integrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA.
Integrated Laboratory Systems, Inc., P.O. Box 13501, Research Triangle Park, NC 27709, USA.
Toxicol In Vitro. 2020 Sep;67:104916. doi: 10.1016/j.tiv.2020.104916. Epub 2020 Jun 14.
Moving toward species-relevant chemical safety assessments and away from animal testing requires access to reliable data to develop and build confidence in new approaches. The Integrated Chemical Environment (ICE) provides tools and curated data centered around chemical safety assessment. This article describes updates to ICE, including improved accessibility and interpretability of in vitro data via mechanistic target mapping and enhanced interactive tools for in vitro to in vivo extrapolation (IVIVE). Mapping of in vitro assay targets to toxicity endpoints of regulatory importance uses literature-based mode-of-action information and controlled terminology from existing knowledge organization systems to support data interoperability with external resources. The most recent ICE update includes Tox21 high-throughput screening data curated using analytical chemistry data and assay-specific parameters to eliminate potential artifacts or unreliable activity. Also included are physicochemical/ADME parameters for over 800,000 chemicals predicted by quantitative structure-activity relationship models. These parameters are used by the new ICE IVIVE tool in combination with the U.S. Environmental Protection Agency's httk R package to estimate in vivo exposures corresponding to in vitro bioactivity concentrations from stored or user-defined assay data. These new ICE features allow users to explore the applications of an expanded data space and facilitate building confidence in non-animal approaches.
迈向与物种相关的化学安全性评估并摆脱动物测试,需要获得可靠的数据,以开发和建立对新方法的信心。综合化学环境 (ICE) 提供了以化学安全性评估为中心的工具和经过策展的数据。本文介绍了 ICE 的更新,包括通过机制靶标映射提高体外数据的可访问性和可解释性,以及增强体外到体内外推 (IVIVE) 的交互式工具。将体外测定靶标映射到具有监管重要性的毒性终点使用基于文献的作用机制信息和来自现有知识组织系统的受控术语,以支持与外部资源的数据互操作性。最新的 ICE 更新包括使用分析化学数据和特定于测定的参数对 Tox21 高通量筛选数据进行策展,以消除潜在的伪影或不可靠的活性。还包括超过 80 万个化学品的物理化学/ADME 参数,这些参数是通过定量构效关系模型预测的。这些参数与美国环境保护署的 httk R 包一起,被新的 ICE IVIVE 工具用于估计从存储或用户定义的测定数据中推断出的体外生物活性浓度对应的体内暴露。这些新的 ICE 功能允许用户探索扩展数据空间的应用,并有助于建立对非动物方法的信心。