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小麦基因家族的全基因组挖掘为盐胁迫响应提供了新见解。

Genome-Wide Mining of Wheat Gene Family Provides New Insights Into Salt Stress Responses.

作者信息

Zhou Xiaoyi, Zhu Xiaoguo, Shao Wenna, Song Jinghan, Jiang Wenqiang, He Yiqin, Yin Junliang, Ma Dongfang, Qiao Yongli

机构信息

Hubei Collaborative Innovation Center for Grain Industry/Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education/College of Agriculture, Yangtze University, Jingzhou, China.

Shanghai Key Laboratory of Plant Molecular Sciences, College of Life Sciences, Shanghai Normal University, Shanghai, China.

出版信息

Front Plant Sci. 2020 Aug 28;11:569838. doi: 10.3389/fpls.2020.569838. eCollection 2020.

Abstract

Domain of unknown function (DUF) proteins constitute a great deal of families of functionally uncharacterized proteins in eukaryotes. The DUF966 gene family is found in monocotyledons, dicotyledons, mosses, and other species. However, little is known about the functions of DUF966 genes in wheat ( L.). In this study, we identified and characterized the TaDUF966 gene family members in wheat by analysis. A total of 28 TaDUF966 proteins were identified in wheat. Phylogenetic analysis divided these proteins into two groups (Groups I and II). Proteins in each group showed a highly conserved DUF966 domain and conserved motif distribution, implying their functional conservation. Analysis of gene expression profiling data showed that some TaDUF966 genes were induced by salt stress. We further confirmed the role of TaDUF966-9B in salt stress using virus induced gene silencing (VIGS) assay. Compared with the empty vector control, the TaDUF966-9B knockdown plants exhibited severe leaf curling at 10 days post-inoculation with BSMV under salt stress, suggesting that TaDUF966 genes play a vital role in salt stress tolerance in wheat. Taken together, these results expand our knowledge of the evolution of the DUF966 gene family in wheat and promote the potential application of these genes in wheat genetic improvement.

摘要

未知功能结构域(DUF)蛋白构成了真核生物中大量功能未知的蛋白家族。DUF966基因家族存在于单子叶植物、双子叶植物、苔藓及其他物种中。然而,关于小麦(L.)中DUF966基因的功能却知之甚少。在本研究中,我们通过分析鉴定并表征了小麦中的TaDUF966基因家族成员。在小麦中总共鉴定出28个TaDUF966蛋白。系统发育分析将这些蛋白分为两组(第一组和第二组)。每组中的蛋白都显示出高度保守的DUF966结构域和保守的基序分布,这意味着它们在功能上具有保守性。基因表达谱数据分析表明,一些TaDUF966基因受盐胁迫诱导。我们使用病毒诱导基因沉默(VIGS)试验进一步证实了TaDUF966-9B在盐胁迫中的作用。与空载体对照相比,在盐胁迫下接种BSMV后10天,TaDUF966-9B基因沉默的植株表现出严重的叶片卷曲,这表明TaDUF966基因在小麦耐盐胁迫中起着至关重要的作用。综上所述,这些结果扩展了我们对小麦中DUF966基因家族进化的认识,并促进了这些基因在小麦遗传改良中的潜在应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edc7/7483657/b3377454789f/fpls-11-569838-g001.jpg

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