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使用传统磁共振成像和机器学习预测帕金森病的进展:放射组学生物标志物在全脑白质中的应用

Predicting the progression of Parkinson's disease using conventional MRI and machine learning: An application of radiomic biomarkers in whole-brain white matter.

作者信息

Shu Zhen-Yu, Cui Si-Jia, Wu Xiao, Xu Yuyun, Huang Peiyu, Pang Pei-Pei, Zhang Minming

机构信息

Department of Radiology, The Second Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, Zhejiang Province, China.

Department of Radiology, Zhejiang Provincial People's Hospital, Affiliated People's Hospital of Hangzhou Medical College, Hangzhou, Zhejiang Province, China.

出版信息

Magn Reson Med. 2021 Mar;85(3):1611-1624. doi: 10.1002/mrm.28522. Epub 2020 Oct 5.

Abstract

PURPOSE

This study aimed to develop and validate a radiomics model based on whole-brain white matter and clinical features to predict the progression of Parkinson disease (PD).

METHODS

PD patient data from the Parkinson's Progress Markers Initiative (PPMI) database was evaluated. Seventy-two PD patients with disease progression, as measured by the Hoehn-Yahr Scale (HYS) (stage 1-5), and 72 PD patients with stable PD were matched by sex, age, and category of HYS and included in the current study. Each individual's T -weighted MRI scans at the baseline timepoint were segmented to isolate whole-brain white matter for radiomics feature extraction. The total dataset was divided into a training and test set according to subject serial number. The size of the training dataset was reduced using the maximum relevance minimum redundancy (mRMR) algorithm to construct a radiomics signature using machine learning. Finally, a joint model was constructed by incorporating the radiomics signature and clinical progression scores. The test data were then used to validate the prediction models, which were evaluated based on discrimination, calibration, and clinical utility.

RESULTS

Based on the overall data, the areas under curve (AUCs) of the joint model, signature and Unified Parkinson Disease Rating Scale III PD rating score were 0.836, 0.795, and 0.550, respectively. Furthermore, the sensitivities were 0.805, 0.875, and 0.292, respectively, and the specificities were 0.722, 0.697, and 0.861, respectively. In addition, the predictive accuracy of the model was 0.827, the sensitivity was 0.829 and the specificity was 0.702 for stage-1 PD. For stage-2 PD, the predictive accuracy of the model was 0.854, the sensitivity was 0.960, and the specificity was 0.600.

CONCLUSION

Our results provide evidence that conventional structural MRI can predict the progression of PD. This work also supports the use of a simple radiomics signature built from whole-brain white matter features as a useful tool for the assessment and monitoring of PD progression.

摘要

目的

本研究旨在开发并验证一种基于全脑白质和临床特征的放射组学模型,以预测帕金森病(PD)的进展。

方法

对帕金森病进展标志物计划(PPMI)数据库中的PD患者数据进行评估。根据Hoehn-Yahr量表(HYS)(1-5期)测量,选取72例疾病进展的PD患者和72例病情稳定的PD患者,按照性别、年龄和HYS类别进行匹配,并纳入本研究。在基线时间点对每个个体的T加权MRI扫描进行分割,以分离全脑白质用于放射组学特征提取。根据受试者序列号将总数据集分为训练集和测试集。使用最大相关最小冗余(mRMR)算法减少训练数据集的大小,以利用机器学习构建放射组学特征。最后,通过整合放射组学特征和临床进展评分构建联合模型。然后使用测试数据验证预测模型,并基于区分度、校准度和临床实用性对其进行评估。

结果

基于总体数据,联合模型、特征和统一帕金森病评定量表III期PD评定分数的曲线下面积(AUC)分别为0.836、0.795和0.550。此外,敏感性分别为0.805、0.875和0.292,特异性分别为0.722、0.697和0.861。此外,对于1期PD,模型的预测准确率为0.827,敏感性为0.829,特异性为0.702。对于2期PD,模型的预测准确率为0.854,敏感性为0.960,特异性为0.600。

结论

我们的结果提供了证据,表明传统结构MRI可以预测PD的进展。这项工作还支持使用基于全脑白质特征构建的简单放射组学特征作为评估和监测PD进展的有用工具。

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