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本文引用的文献

1
Bacterial Microcompartments: Biomaterials for Synthetic Biology-Based Compartmentalization Strategies.细菌微区室:用于基于合成生物学的区室化策略的生物材料。
ACS Biomater Sci Eng. 2015 Jun 8;1(6):345-351. doi: 10.1021/acsbiomaterials.5b00059. Epub 2015 May 26.
2
Carboxysome genomics: a status report.羧酶体基因组学:现状报告。
Funct Plant Biol. 2002 Apr;29(3):175-182. doi: 10.1071/PP01200.
3
Decoding the stoichiometric composition and organisation of bacterial metabolosomes.解析细菌代谢体的化学计量组成和结构。
Nat Commun. 2020 Apr 24;11(1):1976. doi: 10.1038/s41467-020-15888-4.
4
Apparent size and morphology of bacterial microcompartments varies with technique.细菌微室的表观大小和形态随技术而变化。
PLoS One. 2020 Mar 9;15(3):e0226395. doi: 10.1371/journal.pone.0226395. eCollection 2020.
5
Genetic Characterization of a Glycyl Radical Microcompartment Used for 1,2-Propanediol Fermentation by Uropathogenic Escherichia coli CFT073.用于 1,2-丙二醇发酵的尿路致病性大肠杆菌 CFT073 甘氨酰基自由基微区室的遗传特征。
J Bacteriol. 2020 Apr 9;202(9). doi: 10.1128/JB.00017-20.
6
Encapsulation mechanisms and structural studies of GRM2 bacterial microcompartment particles.GRM2 细菌微隔间颗粒的包封机制和结构研究。
Nat Commun. 2020 Jan 20;11(1):388. doi: 10.1038/s41467-019-14205-y.
7
Functional protein shells fabricated from the self-assembling protein sheets of prokaryotic organelles.由原核细胞器的自组装蛋白片层构建的功能蛋白壳。
J Mater Chem B. 2020 Jan 22;8(3):523-533. doi: 10.1039/c9tb02224d.
8
Engineering the PduT shell protein to modify the permeability of the 1,2-propanediol microcompartment of .工程化 PduT 外壳蛋白以改变. 1,2-丙二醇微隔间的通透性。
Microbiology (Reading). 2019 Dec;165(12):1355-1364. doi: 10.1099/mic.0.000872.
9
Structure of a Synthetic -Carboxysome Shell.人工合成羧壳结构体。
Plant Physiol. 2019 Nov;181(3):1050-1058. doi: 10.1104/pp.19.00885. Epub 2019 Sep 9.
10
Solution structure and biochemical characterization of a spare part protein that restores activity to an oxygen-damaged glycyl radical enzyme.备用蛋白的结构解析和生化特性研究,该蛋白能够恢复含氧基团损伤甘氨酰基自由基酶的活性。
J Biol Inorg Chem. 2019 Sep;24(6):817-829. doi: 10.1007/s00775-019-01681-2. Epub 2019 Jun 27.

原核细胞器: 和 中的细菌微隔间。

Prokaryotic Organelles: Bacterial Microcompartments in and .

机构信息

The Roy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA, USA 50011.

出版信息

EcoSal Plus. 2020 Oct;9(1). doi: 10.1128/ecosalplus.ESP-0025-2019.

DOI:10.1128/ecosalplus.ESP-0025-2019
PMID:33030141
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7552817/
Abstract

Bacterial microcompartments (MCPs) are proteinaceous organelles consisting of a metabolic pathway encapsulated within a selectively permeable protein shell. Hundreds of species of bacteria produce MCPs of at least nine different types, and MCP metabolism is associated with enteric pathogenesis, cancer, and heart disease. This review focuses chiefly on the four types of catabolic MCPs (metabolosomes) found in and : the propanediol utilization (), ethanolamine utilization (), choline utilization (), and glycyl radical propanediol () MCPs. Although the great majority of work done on catabolic MCPs has been carried out with and , research outside the group is mentioned where necessary for a comprehensive understanding. Salient characteristics found across MCPs are discussed, including enzymatic reactions and shell composition, with particular attention paid to key differences between classes of MCPs. We also highlight relevant research on the dynamic processes of MCP assembly, protein targeting, and the mechanisms that underlie selective permeability. Lastly, we discuss emerging biotechnology applications based on MCP principles and point out challenges, unanswered questions, and future directions.

摘要

细菌微室(MCP)是一种由蛋白质组成的细胞器,由代谢途径包裹在选择性渗透的蛋白质壳内。数百种细菌产生至少九种不同类型的 MCP,MCP 代谢与肠道发病机制、癌症和心脏病有关。这篇综述主要集中在 和 中发现的四种分解代谢 MCP(代谢体)上:丙二醇利用()、乙醇胺利用()、胆碱利用()和甘氨酰基自由基丙二醇()MCP。尽管大多数关于分解代谢 MCP 的工作都是在 和 中完成的,但在必要时也提到了该小组之外的研究,以全面了解。讨论了跨 MCP 的显著特征,包括酶反应和外壳组成,特别注意 MCP 类之间的关键差异。我们还强调了有关 MCP 组装、蛋白质靶向和选择性渗透性基础的动态过程的相关研究。最后,我们根据 MCP 原则讨论了新兴的生物技术应用,并指出了挑战、未解决的问题和未来的方向。