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通过小角X射线散射/ X射线粉末衍射协同方法对生长的蛋白质晶体进行快速筛选。

Rapid screening of grown protein crystals via a small-angle X-ray scattering/X-ray powder diffraction synergistic approach.

作者信息

Lahey-Rudolph Janine Mia, Schönherr Robert, Jeffries Cy M, Blanchet Clément E, Boger Juliane, Ferreira Ramos Ana Sofia, Riekehr Winnie Maria, Triandafillidis Dimitris-Panagiotis, Valmas Alexandros, Margiolaki Irene, Svergun Dmitri, Redecke Lars

机构信息

Institute of Biochemistry, University of Lübeck, Ratzeburger Allee 160, Lübeck 23562, Germany.

Center for Free-Electron Laser Science (CFEL), Deutsches Elektronen Synchrotron (DESY), Notkestrasse 85, Hamburg 22607, Germany.

出版信息

J Appl Crystallogr. 2020 Sep 25;53(Pt 5):1169-1180. doi: 10.1107/S1600576720010687. eCollection 2020 Oct 1.

DOI:10.1107/S1600576720010687
PMID:33117106
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7534541/
Abstract

Crystallization of recombinant proteins in living cells is an exciting new approach for structural biology that provides an alternative to the time-consuming optimization of protein purification and extensive crystal screening steps. Exploiting the potential of this approach requires a more detailed understanding of the cellular processes involved and versatile screening strategies for crystals in a cell culture. Particularly if the target protein forms crystalline structures of unknown morphology only in a small fraction of cells, their detection by applying standard visualization techniques can be time consuming and difficult owing to the environmental challenges imposed by the living cells. In this study, a high-brilliance and low-background bioSAXS beamline is employed for rapid and sensitive detection of protein microcrystals grown within insect cells. On the basis of the presence of Bragg peaks in the recorded small-angle X-ray scattering profiles, it is possible to assess within seconds whether a cell culture contains microcrystals, even in a small percentage of cells. Since such information cannot be obtained by other established detection methods in this time frame, this screening approach has the potential to overcome one of the bottlenecks of intracellular crystal detection. Moreover, the association of the Bragg peak positions in the scattering curves with the unit-cell composition of the protein crystals raises the possibility of investigating the impact of environmental conditions on the crystal structure of the intracellular protein crystals. This information provides valuable insights helping to further understand the crystallization process.

摘要

重组蛋白在活细胞中的结晶是结构生物学中一种令人兴奋的新方法,它为耗时的蛋白质纯化优化和广泛的晶体筛选步骤提供了一种替代方案。要充分利用这种方法的潜力,需要更详细地了解其中涉及的细胞过程,以及针对细胞培养中晶体的通用筛选策略。特别是如果目标蛋白仅在一小部分细胞中形成形态未知的晶体结构,由于活细胞带来的环境挑战,应用标准可视化技术检测它们可能既耗时又困难。在本研究中,利用高亮度和低背景的生物小角X射线散射光束线对昆虫细胞内生长的蛋白质微晶进行快速灵敏的检测。根据记录的小角X射线散射图谱中布拉格峰的存在情况,即使在细胞占比很小的情况下,也能在几秒钟内评估细胞培养物中是否含有微晶。由于在这个时间范围内无法通过其他既定的检测方法获得此类信息,这种筛选方法有可能克服细胞内晶体检测的瓶颈之一。此外,散射曲线中布拉格峰位置与蛋白质晶体晶胞组成的关联增加了研究环境条件对细胞内蛋白质晶体结构影响的可能性。这些信息为进一步理解结晶过程提供了有价值的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/4a6adf04a1d3/j-53-01169-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/862b13f3f71b/j-53-01169-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/9c5e44bac8a1/j-53-01169-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/61e338b4f96d/j-53-01169-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/50325319c081/j-53-01169-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/303e6284f57c/j-53-01169-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/8a031294b6c1/j-53-01169-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/4a6adf04a1d3/j-53-01169-fig7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/862b13f3f71b/j-53-01169-fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/9c5e44bac8a1/j-53-01169-fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/61e338b4f96d/j-53-01169-fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/50325319c081/j-53-01169-fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/303e6284f57c/j-53-01169-fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/8a031294b6c1/j-53-01169-fig6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d81d/7534541/4a6adf04a1d3/j-53-01169-fig7.jpg

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