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Application of enzymatic and bacterial biodelignification systems for enhanced breakdown of model lignocellulosic wastes.酶和细菌生物精炼系统在增强模型木质纤维素废物分解中的应用。
Sci Total Environ. 2020 Aug 1;728:138741. doi: 10.1016/j.scitotenv.2020.138741. Epub 2020 Apr 15.
2
Insights into AK1 through Whole Genome Sequencing: A Thermophilic Bacterium Isolated from a Hot Spring in Saudi Arabia.通过全基因组测序深入了解 AK1：从沙特阿拉伯温泉中分离出的一种嗜热细菌。
Biomed Res Int. 2018 May 24;2018:5862437. doi: 10.1155/2018/5862437. eCollection 2018.
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KBase: The United States Department of Energy Systems Biology Knowledgebase.KBase：美国能源部系统生物学知识库。
Nat Biotechnol. 2018 Jul 6;36(7):566-569. doi: 10.1038/nbt.4163.
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FQC Dashboard: integrates FastQC results into a web-based, interactive, and extensible FASTQ quality control tool.FQC仪表板：将FastQC结果集成到一个基于网络的、交互式的且可扩展的FASTQ质量控制工具中。
Bioinformatics. 2017 Oct 1;33(19):3137-3139. doi: 10.1093/bioinformatics/btx373. Epub 2017 Jun 9.
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Brevibacillus borstelensis and Streptomyces albogriseolus have roles to play in degradation of herbicide, sulfosulfuron.博斯德短芽孢杆菌和浅灰链霉菌在除草剂甲磺隆的降解过程中发挥作用。
3 Biotech. 2016 Dec;6(2):246. doi: 10.1007/s13205-016-0562-z. Epub 2016 Nov 16.
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Icarus: visualizer for de novo assembly evaluation.Icarus：从头组装评估的可视化工具。
Bioinformatics. 2016 Nov 1;32(21):3321-3323. doi: 10.1093/bioinformatics/btw379. Epub 2016 Jul 4.
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NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
8
Draft Genome Sequence of Brevibacillus borstelensis cifa_chp40, a Thermophilic Strain Having Biotechnological Importance.嗜热菌株博斯特伦短芽孢杆菌cifa_chp40的基因组序列草图，该菌株具有生物技术重要性。
J Genomics. 2016 Feb 15;4:4-6. doi: 10.7150/jgen.14036. eCollection 2016.
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Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.
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MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph.MEGAHIT：通过简洁的 de Bruijn 图实现的超快速单节点解决方案，适用于大型和复杂的宏基因组组装。
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从适应高粱的微生物群落中分离出的博斯特短芽孢杆菌SDM的全基因组序列。

Whole-Genome Sequence of Brevibacillus borstelensis SDM, Isolated from a Sorghum-Adapted Microbial Community.

作者信息

Aulitto Martina, Tom Lauren M, Ceja-Navarro Javier A, Simmons Blake A, Singer Steven W

机构信息

Joint BioEnergy Institute, Emeryville, California, USA.

Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

出版信息

Microbiol Resour Announc. 2020 Nov 25;9(48):e01046-20. doi: 10.1128/MRA.01046-20.

DOI:10.1128/MRA.01046-20
PMID:33239462
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7686420/
Abstract

The isolation of novel microbes from environmental samples continues to be a key strategy for the discovery of new metabolic capacities for the degradation and transformation of lignocellulose. We report the draft genome sequence of a new strain of isolated from a sorghum-adapted microbial community derived from a compost sample.

摘要

从环境样本中分离新型微生物仍然是发现木质纤维素降解和转化新代谢能力的关键策略。我们报告了从一份堆肥样本中适应高粱的微生物群落分离出的新菌株的基因组序列草图。