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TREND: a platform for exploring protein function in prokaryotes based on phylogenetic, domain architecture and gene neighborhood analyses.趋势:一个基于系统发育、结构域和基因邻域分析的探索原核生物蛋白功能的平台。
Nucleic Acids Res. 2020 Jul 2;48(W1):W72-W76. doi: 10.1093/nar/gkaa243.
2
How Bacterial Chemoreceptors Evolve Novel Ligand Specificities.细菌化学感受器如何进化出新型配体特异性。
mBio. 2020 Jan 21;11(1):e03066-19. doi: 10.1128/mBio.03066-19.
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Avian Intestinal Mucus Modulates Gene Expression in a Host-Specific Manner.禽类肠道黏液以宿主特异性方式调节基因表达。
Front Microbiol. 2019 Jan 7;9:3215. doi: 10.3389/fmicb.2018.03215. eCollection 2018.
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The role of chemotaxis during Campylobacter jejuni colonisation and pathogenesis.弯曲杆菌定植和发病过程中的趋化作用。
Curr Opin Microbiol. 2019 Feb;47:32-37. doi: 10.1016/j.mib.2018.11.001. Epub 2018 Nov 23.
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UniProt: a worldwide hub of protein knowledge.UniProt:蛋白质知识的全球枢纽。
Nucleic Acids Res. 2019 Jan 8;47(D1):D506-D515. doi: 10.1093/nar/gky1049.
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The Pfam protein families database in 2019.2019 年 Pfam 蛋白质家族数据库。
Nucleic Acids Res. 2019 Jan 8;47(D1):D427-D432. doi: 10.1093/nar/gky995.
7
The transducer-like protein Tlp12 of Campylobacter jejuni is involved in glutamate and pyruvate chemotaxis.空肠弯曲菌的类转导蛋白 Tlp12 参与谷氨酸和丙酮酸的化学趋向性。
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8
Two citrate chemoreceptors involved in chemotaxis to citrate and/or citrate-metal complexes in Ralstonia pseudosolanacearum.两个参与对青枯雷尔氏菌中柠檬酸盐和/或柠檬酸盐-金属复合物进行趋化作用的柠檬酸盐化学感受器。
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MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.MEGA X:跨越计算平台的分子进化遗传学分析。
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化学感受器 Tlp10 具有双模态配体结合域和对多种化学效应物的特异性。

The chemoreceptor Tlp10 has a bimodal ligand-binding domain and specificity for multiple classes of chemoeffectors.

机构信息

Institute for Glycomics, Griffith University, Gold Coast Campus, Southport, QLD 4222, Australia.

Department of Microbiology, The Ohio State University, Columbus, OH 43210, USA.

出版信息

Sci Signal. 2021 Jan 5;14(664):eabc8521. doi: 10.1126/scisignal.abc8521.

DOI:10.1126/scisignal.abc8521
PMID:33402336
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8112392/
Abstract

is a bacterial pathogen that is a common cause of enteritis in humans. We identified a previously uncharacterized type of sensory domain in the periplasmic region of the chemoreceptor Tlp10, termed the DAHL domain, that is predicted to have a bimodular helical architecture. Through two independent ligand-binding sites in this domain, Tlp10 responded to molecular aspartate, isoleucine, fumarate, malate, fucose, and mannose as attractants and to arginine, galactose, and thiamine as repellents. Tlp10 also recognized glycan ligands when present as terminal and intermediate residues of complex structures, such as the fucosylated human ganglioside GM1 and Lewis antigen. A mutant strain lacking the ligand-binding sites was attenuated in its ability to colonize avian caeca and to adhere to cultured human intestinal cells, indicating the potential involvement of the DAHL domain in host colonization and disease. The Tlp10 intracellular signaling domain interacted with the scaffolding proteins CheV and CheW, which couple chemoreceptors to intracellular signaling machinery, and with the signaling domains of other chemoreceptors, suggesting a key role for Tlp10 in signal transduction and incorporation into sensory arrays. We identified the DAHL domain in other bacterial signal transduction proteins, including the essential virulence induction protein VirA from the plant pathogen Together, these results suggest a potential link between Tlp10 and virulence.

摘要

是一种细菌病原体,是人类肠炎的常见病因。我们在化学感受器 Tlp10 的周质区域中鉴定出一种以前未被描述的感觉结构域,称为 DAHL 结构域,该结构域预测具有双模块螺旋结构。通过该结构域中的两个独立配体结合位点,Tlp10 对分子天冬氨酸、异亮氨酸、富马酸、苹果酸、岩藻糖和甘露糖作为吸引剂,对精氨酸、半乳糖和硫胺素作为排斥剂作出反应。当 Tlp10 作为复杂结构的末端和中间残基存在时,它还能识别糖基配体,例如岩藻糖基化的人神经节苷脂 GM1 和 Lewis 抗原。缺乏配体结合位点的突变株在定殖禽类盲肠和粘附培养的人肠细胞的能力上减弱,表明 DAHL 结构域可能参与宿主定植和疾病。Tlp10 的细胞内信号转导结构域与支架蛋白 CheV 和 CheW 相互作用,CheV 和 CheW 将化学感受器与细胞内信号转导机制偶联,并且与其他化学感受器的信号结构域相互作用,这表明 Tlp10 在信号转导和整合到感觉阵列中起着关键作用。我们在其他细菌信号转导蛋白中鉴定出了 DAHL 结构域,包括植物病原体 中的必需毒力诱导蛋白 VirA。总之,这些结果表明 Tlp10 与 毒力之间存在潜在联系。