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一种在近生理条件下研究液-液相分离动力学的通用方法。

A generic approach to study the kinetics of liquid-liquid phase separation under near-native conditions.

机构信息

VIB-VUB Center for Structural Biology, VIB, Brussels, Belgium.

Structural Biology Brussels, Vrije Universiteit Brussel, Brussels, Belgium.

出版信息

Commun Biol. 2021 Jan 19;4(1):77. doi: 10.1038/s42003-020-01596-8.

Abstract

Understanding the kinetics, thermodynamics, and molecular mechanisms of liquid-liquid phase separation (LLPS) is of paramount importance in cell biology, requiring reproducible methods for studying often severely aggregation-prone proteins. Frequently applied approaches for inducing LLPS, such as dilution of the protein from an urea-containing solution or cleavage of its fused solubility tag, often lead to very different kinetic behaviors. Here we demonstrate that at carefully selected pH values proteins such as the low-complexity domain of hnRNPA2, TDP-43, and NUP98, or the stress protein ERD14, can be kept in solution and their LLPS can then be induced by a jump to native pH. This approach represents a generic method for studying the full kinetic trajectory of LLPS under near native conditions that can be easily controlled, providing a platform for the characterization of physiologically relevant phase-separation behavior of diverse proteins.

摘要

理解液-液相分离(LLPS)的动力学、热力学和分子机制在细胞生物学中至关重要,这需要可重现的方法来研究常常容易聚集的蛋白质。经常应用的诱导 LLPS 的方法,如从含有脲的溶液中稀释蛋白质或切割其融合的可溶性标签,通常会导致非常不同的动力学行为。在这里,我们证明了在精心选择的 pH 值下,hnRNPA2 的低复杂度结构域、TDP-43 和 NUP98 或应激蛋白 ERD14 等蛋白质可以保持在溶液中,然后通过跳跃回到天然 pH 值来诱导它们的 LLPS。这种方法代表了一种在接近天然条件下研究 LLPS 全动力学轨迹的通用方法,可以轻松控制,为多种蛋白质的生理相关相分离行为的表征提供了一个平台。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7497/7815728/dfdbdf022cd5/42003_2020_1596_Fig1_HTML.jpg

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