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本文引用的文献

1
Outer membrane vesicles catabolize lignin-derived aromatic compounds in KT2440.外膜囊泡代谢 KT2440 中的木质素衍生芳香化合物。
Proc Natl Acad Sci U S A. 2020 Apr 28;117(17):9302-9310. doi: 10.1073/pnas.1921073117. Epub 2020 Apr 3.
2
Identification of oleaginous yeasts that metabolize aromatic compounds.鉴定代谢芳香族化合物的产油酵母。
J Ind Microbiol Biotechnol. 2020 Oct;47(9-10):801-813. doi: 10.1007/s10295-020-02269-5. Epub 2020 Mar 27.
3
The ProteomeXchange consortium in 2020: enabling 'big data' approaches in proteomics.2020 年蛋白质组交换联盟:在蛋白质组学中启用“大数据”方法。
Nucleic Acids Res. 2020 Jan 8;48(D1):D1145-D1152. doi: 10.1093/nar/gkz984.
4
Plastics: Environmental and Biotechnological Perspectives on Microbial Degradation.塑料:微生物降解的环境和生物技术视角。
Appl Environ Microbiol. 2019 Sep 17;85(19). doi: 10.1128/AEM.01095-19. Print 2019 Oct 1.
5
A comparison between the homocyclic aromatic metabolic pathways from plant-derived compounds by bacteria and fungi.细菌和真菌中植物源性化合物中环芳烃代谢途径的比较。
Biotechnol Adv. 2019 Nov 15;37(7):107396. doi: 10.1016/j.biotechadv.2019.05.002. Epub 2019 May 7.
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InterPro in 2019: improving coverage, classification and access to protein sequence annotations.InterPro 在 2019 年:提高蛋白质序列注释的覆盖范围、分类和访问。
Nucleic Acids Res. 2019 Jan 8;47(D1):D351-D360. doi: 10.1093/nar/gky1100.
7
The PRIDE database and related tools and resources in 2019: improving support for quantification data.PRIDE 数据库及相关工具和资源在 2019 年的进展:提高定量数据支持。
Nucleic Acids Res. 2019 Jan 8;47(D1):D442-D450. doi: 10.1093/nar/gky1106.
8
Isotope-Assisted Metabolite Analysis Sheds Light on Central Carbon Metabolism of a Model Cellulolytic Bacterium .同位素辅助代谢物分析揭示了一种典型纤维素分解细菌的中心碳代谢
Front Microbiol. 2018 Aug 23;9:1947. doi: 10.3389/fmicb.2018.01947. eCollection 2018.
9
A promiscuous cytochrome P450 aromatic O-demethylase for lignin bioconversion.一种用于木质素生物转化的混杂细胞色素 P450 芳香 O-脱甲基酶。
Nat Commun. 2018 Jun 27;9(1):2487. doi: 10.1038/s41467-018-04878-2.
10
Coupling Secretomics with Enzyme Activities To Compare the Temporal Processes of Wood Metabolism among White and Brown Rot Fungi.将 secretomics 与酶活性相偶联,以比较白腐菌和褐腐菌木质素代谢的时间过程。
Appl Environ Microbiol. 2018 Aug 1;84(16). doi: 10.1128/AEM.00159-18. Print 2018 Aug 15.

白腐真菌中木质素分解的细胞内途径。

Intracellular pathways for lignin catabolism in white-rot fungi.

机构信息

Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, Golden, CO 80401.

Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA 99354.

出版信息

Proc Natl Acad Sci U S A. 2021 Mar 2;118(9). doi: 10.1073/pnas.2017381118.

DOI:10.1073/pnas.2017381118
PMID:33622792
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7936344/
Abstract

Lignin is a biopolymer found in plant cell walls that accounts for 30% of the organic carbon in the biosphere. White-rot fungi (WRF) are considered the most efficient organisms at degrading lignin in nature. While lignin depolymerization by WRF has been extensively studied, the possibility that WRF are able to utilize lignin as a carbon source is still a matter of controversy. Here, we employ C-isotope labeling, systems biology approaches, and in vitro enzyme assays to demonstrate that two WRF, and , funnel carbon from lignin-derived aromatic compounds into central carbon metabolism via intracellular catabolic pathways. These results provide insights into global carbon cycling in soil ecosystems and furthermore establish a foundation for employing WRF in simultaneous lignin depolymerization and bioconversion to bioproducts-a key step toward enabling a sustainable bioeconomy.

摘要

木质素是一种存在于植物细胞壁中的生物聚合物,占生物圈有机碳的 30%。白腐真菌(WRF)被认为是自然界中降解木质素最有效的生物。虽然 WRF 对木质素的解聚作用已经得到了广泛的研究,但 WRF 是否能够将木质素用作碳源仍然存在争议。在这里,我们采用 C 同位素标记、系统生物学方法和体外酶测定来证明两种 WRF, 和 ,通过细胞内代谢途径将木质素衍生的芳香化合物中的碳转化为中心碳代谢。这些结果深入了解了土壤生态系统中的全球碳循环,并且为在同时进行木质素解聚和生物转化为生物制品的过程中利用 WRF 奠定了基础,这是实现可持续生物经济的关键步骤。