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Artificial Intelligence for COVID-19 Drug Discovery and Vaccine Development.

作者信息

Keshavarzi Arshadi Arash, Webb Julia, Salem Milad, Cruz Emmanuel, Calad-Thomson Stacie, Ghadirian Niloofar, Collins Jennifer, Diez-Cecilia Elena, Kelly Brendan, Goodarzi Hani, Yuan Jiann Shiun

机构信息

Burnett School of Biomedical Sciences, University of Central Florida, Orlando, FL, United States.

Department of Electrical and Computer Engineering, University of Central Florida, Orlando, FL, United States.

出版信息

Front Artif Intell. 2020 Aug 18;3:65. doi: 10.3389/frai.2020.00065. eCollection 2020.


DOI:10.3389/frai.2020.00065
PMID:33733182
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7861281/
Abstract

SARS-COV-2 has roused the scientific community with a call to action to combat the growing pandemic. At the time of this writing, there are as yet no novel antiviral agents or approved vaccines available for deployment as a frontline defense. Understanding the pathobiology of COVID-19 could aid scientists in their discovery of potent antivirals by elucidating unexplored viral pathways. One method for accomplishing this is the leveraging of computational methods to discover new candidate drugs and vaccines . In the last decade, machine learning-based models, trained on specific biomolecules, have offered inexpensive and rapid implementation methods for the discovery of effective viral therapies. Given a target biomolecule, these models are capable of predicting inhibitor candidates in a structural-based manner. If enough data are presented to a model, it can aid the search for a drug or vaccine candidate by identifying patterns within the data. In this review, we focus on the recent advances of COVID-19 drug and vaccine development using artificial intelligence and the potential of intelligent training for the discovery of COVID-19 therapeutics. To facilitate applications of deep learning for SARS-COV-2, we highlight multiple molecular targets of COVID-19, inhibition of which may increase patient survival. Moreover, we present CoronaDB-AI, a dataset of compounds, peptides, and epitopes discovered either or that can be potentially used for training models in order to extract COVID-19 treatment. The information and datasets provided in this review can be used to train deep learning-based models and accelerate the discovery of effective viral therapies.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b051/7861281/2d6b488859cb/frai-03-00065-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b051/7861281/2d6b488859cb/frai-03-00065-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b051/7861281/2d6b488859cb/frai-03-00065-g0001.jpg

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[2]
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[3]
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[4]
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[5]
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[6]
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[7]
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[8]
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[9]
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[10]
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本文引用的文献

[1]
Prediction of Potential Commercially Available Inhibitors against SARS-CoV-2 by Multi-Task Deep Learning Model.

Biomolecules. 2022-8-21

[2]
The epidemiology and therapeutic options for the COVID-19.

Precis Clin Med. 2020-6

[3]
AI-Aided Design of Novel Targeted Covalent Inhibitors against SARS-CoV-2.

Biomolecules. 2022-5-25

[4]
Identification of novel compounds against three targets of SARS CoV-2 coronavirus by combined virtual screening and supervised machine learning.

Comput Biol Med. 2021-6

[5]
Network bioinformatics analysis provides insight into drug repurposing for COVID-19.

Med Drug Discov. 2021-6

[6]
Descriptor Free QSAR Modeling Using Deep Learning With Long Short-Term Memory Neural Networks.

Front Artif Intell. 2019-9-6

[7]
Potential neutralizing antibodies discovered for novel corona virus using machine learning.

Sci Rep. 2021-3-4

[8]
design of new chemical entities for SARS-CoV-2 using artificial intelligence.

Future Med Chem. 2021-3

[9]
Artificial intelligence predicts the immunogenic landscape of SARS-CoV-2 leading to universal blueprints for vaccine designs.

Sci Rep. 2020-12-23

[10]
Identification and validation of 174 COVID-19 vaccine candidate epitopes reveals low performance of common epitope prediction tools.

Sci Rep. 2020-11-24

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