• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

从群体大脑影像中发现表型

Phenotype discovery from population brain imaging.

机构信息

Centre for Functional MRI of the Brain (FMRIB), Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, UK.

Centre for Functional MRI of the Brain (FMRIB), Nuffield Department of Clinical Neurosciences, Wellcome Centre for Integrative Neuroimaging, University of Oxford, Oxford, UK; Radboud University Medical Centre, Department of Cognitive Neuroscience, Nijmegen, the Netherlands; Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen, Nijmegen, the Netherlands.

出版信息

Med Image Anal. 2021 Jul;71:102050. doi: 10.1016/j.media.2021.102050. Epub 2021 Mar 31.

DOI:10.1016/j.media.2021.102050
PMID:33905882
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8850869/
Abstract

Neuroimaging allows for the non-invasive study of the brain in rich detail. Data-driven discovery of patterns of population variability in the brain has the potential to be extremely valuable for early disease diagnosis and understanding the brain. The resulting patterns can be used as imaging-derived phenotypes (IDPs), and may complement existing expert-curated IDPs. However, population datasets, comprising many different structural and functional imaging modalities from thousands of subjects, provide a computational challenge not previously addressed. Here, for the first time, a multimodal independent component analysis approach is presented that is scalable for data fusion of voxel-level neuroimaging data in the full UK Biobank (UKB) dataset, that will soon reach 100,000 imaged subjects. This new computational approach can estimate modes of population variability that enhance the ability to predict thousands of phenotypic and behavioural variables using data from UKB and the Human Connectome Project. A high-dimensional decomposition achieved improved predictive power compared with widely-used analysis strategies, single-modality decompositions and existing IDPs. In UKB data (14,503 subjects with 47 different data modalities), many interpretable associations with non-imaging phenotypes were identified, including multimodal spatial maps related to fluid intelligence, handedness and disease, in some cases where IDP-based approaches failed.

摘要

神经影像学可以对大脑进行非侵入性的详细研究。在大脑中发现人群变异性模式的数据驱动式发现对于早期疾病诊断和了解大脑具有巨大的潜在价值。由此产生的模式可以用作成像衍生表型(IDP),并可能补充现有的专家 curated IDP。然而,由数千名受试者的多种不同结构和功能成像方式组成的人群数据集,带来了前所未有的计算挑战。在此,首次提出了一种多模态独立成分分析方法,该方法可扩展用于融合全英国生物库(UKB)数据集的体素水平神经影像学数据,该数据集很快将达到 10 万名成像受试者。这种新的计算方法可以估计人群变异性模式,从而提高使用 UKB 和人类连接组计划的数据预测数千种表型和行为变量的能力。与广泛使用的分析策略、单模态分解和现有的 IDP 相比,高维分解实现了更高的预测能力。在 UKB 数据(14503 名受试者,47 种不同的数据模态)中,确定了许多与非成像表型相关的可解释关联,包括与流体智力、利手性和疾病相关的多模态空间图,在某些情况下,基于 IDP 的方法无法做到这一点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/ccbc3e74068a/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/661ae5cb51a0/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/9842e24e9187/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/2af8f9708b5b/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/a868ee5be658/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/6dcab6a08084/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/ccbc3e74068a/gr5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/661ae5cb51a0/fx1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/9842e24e9187/gr1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/2af8f9708b5b/gr2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/a868ee5be658/gr3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/6dcab6a08084/gr4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e8a3/8850869/ccbc3e74068a/gr5.jpg

相似文献

1
Phenotype discovery from population brain imaging.从群体大脑影像中发现表型
Med Image Anal. 2021 Jul;71:102050. doi: 10.1016/j.media.2021.102050. Epub 2021 Mar 31.
2
Supervised Phenotype Discovery From Multimodal Brain Imaging.基于多模态脑成像的监督式表型发现
IEEE Trans Med Imaging. 2023 Mar;42(3):834-849. doi: 10.1109/TMI.2022.3218720. Epub 2023 Mar 2.
3
Reliability of multi-site UK Biobank MRI brain phenotypes for the assessment of neuropsychiatric complications of SARS-CoV-2 infection: The COVID-CNS travelling heads study.多中心 UK Biobank 磁共振成像脑表型评估 SARS-CoV-2 感染神经精神并发症的可靠性:COVID-CNS 游走头部研究。
PLoS One. 2022 Sep 29;17(9):e0273704. doi: 10.1371/journal.pone.0273704. eCollection 2022.
4
Integrated brain connectivity analysis with fMRI, DTI, and sMRI powered by interpretable graph neural networks.基于可解释图神经网络的功能磁共振成像(fMRI)、扩散张量成像(DTI)和结构磁共振成像(sMRI)的脑连接性综合分析。
Med Image Anal. 2025 Jul;103:103570. doi: 10.1016/j.media.2025.103570. Epub 2025 Apr 9.
5
A unified framework for association and prediction from vertex-wise grey-matter structure.一种基于体素水平灰质结构的关联和预测的统一框架。
Hum Brain Mapp. 2020 Oct 1;41(14):4062-4076. doi: 10.1002/hbm.25109. Epub 2020 Jul 20.
6
Evaluating the effects of high-throughput structural neuroimaging predictors on whole-brain functional connectome outcomes via network-based matrix-on-vector regression.通过基于网络的矩阵对向量回归评估高通量结构神经影像预测指标对全脑功能连接组结果的影响。
Biometrics. 2025 Jan 7;81(1). doi: 10.1093/biomtc/ujaf027.
7
A multivariate distance-based analytic framework for connectome-wide association studies.一种基于多元距离的连接组学全基因组关联研究分析框架。
Neuroimage. 2014 Jun;93 Pt 1(0 1):74-94. doi: 10.1016/j.neuroimage.2014.02.024. Epub 2014 Feb 28.
8
[A review on the application of UK Biobank in neuroimaging].[英国生物银行在神经影像学中的应用综述]
Sheng Wu Yi Xue Gong Cheng Xue Za Zhi. 2021 Jun 25;38(3):594-601. doi: 10.7507/1001-5515.202012059.
9
ANTsX neuroimaging-derived structural phenotypes of UK Biobank.英国生物库的 ANTsX 神经影像学衍生结构表型。
Sci Rep. 2024 Apr 17;14(1):8848. doi: 10.1038/s41598-024-59440-6.
10
Multimodal fusion analysis of functional, cerebrovascular and structural neuroimaging in healthy aging subjects.健康老年人功能、脑血管和结构神经影像学的多模态融合分析。
Hum Brain Mapp. 2022 Dec 15;43(18):5490-5508. doi: 10.1002/hbm.26025. Epub 2022 Jul 20.

引用本文的文献

1
The Shape of the Brain's Connections Is Predictive of Cognitive Performance: An Explainable Machine Learning Study.大脑连接的形状可预测认知表现:一项可解释的机器学习研究。
Hum Brain Mapp. 2025 Apr 1;46(5):e70166. doi: 10.1002/hbm.70166.
2
Efficient multi-phenotype genome-wide analysis identifies genetic associations for unsupervised deep-learning-derived high-dimensional brain imaging phenotypes.高效的多表型全基因组分析确定了与无监督深度学习衍生的高维脑成像表型的遗传关联。
medRxiv. 2024 Dec 8:2024.12.06.24318618. doi: 10.1101/2024.12.06.24318618.
3
Brain imaging traits and epilepsy: Unraveling causal links via mendelian randomization.

本文引用的文献

1
Brain aging comprises many modes of structural and functional change with distinct genetic and biophysical associations.脑老化包括多种结构和功能变化模式,具有不同的遗传和生物物理关联。
Elife. 2020 Mar 5;9:e52677. doi: 10.7554/eLife.52677.
2
Denoising scanner effects from multimodal MRI data using linked independent component analysis.使用链接独立成分分析消除多模态 MRI 数据中的扫描仪噪声效应。
Neuroimage. 2020 Mar;208:116388. doi: 10.1016/j.neuroimage.2019.116388. Epub 2019 Nov 23.
3
Handedness, language areas and neuropsychiatric diseases: insights from brain imaging and genetics.
脑影像学特征与癫痫:通过孟德尔随机化揭示因果关联。
Brain Behav. 2024 Oct;14(10):e70051. doi: 10.1002/brb3.70051.
4
Deep multimodal saliency parcellation of cerebellar pathways: Linking microstructure and individual function through explainable multitask learning.深度多模态小脑通路显著性分割:通过可解释的多任务学习将微观结构和个体功能联系起来。
Hum Brain Mapp. 2024 Aug 15;45(12):e70008. doi: 10.1002/hbm.70008.
5
Nonlinear latent representations of high-dimensional task-fMRI data: Unveiling cognitive and behavioral insights in heterogeneous spatial maps.高维任务功能磁共振成像数据的非线性潜在表征:揭示异质空间图谱中的认知和行为见解。
PLoS One. 2024 Aug 8;19(8):e0308329. doi: 10.1371/journal.pone.0308329. eCollection 2024.
6
TractoSCR: a novel supervised contrastive regression framework for prediction of neurocognitive measures using multi-site harmonized diffusion MRI tractography.TractoSCR:一种用于使用多站点协调扩散磁共振成像纤维束成像预测神经认知指标的新型监督对比回归框架。
Front Neurosci. 2024 Jun 26;18:1411797. doi: 10.3389/fnins.2024.1411797. eCollection 2024.
7
Casual associations between brain structure and sarcopenia: A large-scale genetic correlation and mendelian randomization study.大脑结构与肌肉减少症之间的偶然关联:一项大规模的遗传相关性和孟德尔随机化研究。
Aging Cell. 2024 Oct;23(10):e14252. doi: 10.1111/acel.14252. Epub 2024 Jun 17.
8
Multiscale Modes of Functional Brain Connectivity.功能性脑连接的多尺度模式
bioRxiv. 2024 Jun 1:2024.05.28.596120. doi: 10.1101/2024.05.28.596120.
9
Deep learning imaging phenotype can classify metabolic syndrome and is predictive of cardiometabolic disorders.深度学习成像表型可对代谢综合征进行分类,且可预测心脏代谢紊乱。
J Transl Med. 2024 May 8;22(1):434. doi: 10.1186/s12967-024-05163-1.
10
TractGeoNet: A geometric deep learning framework for pointwise analysis of tract microstructure to predict language assessment performance.TractGeoNet:一种用于逐点分析束状微结构以预测语言评估表现的几何深度学习框架。
Med Image Anal. 2024 May;94:103120. doi: 10.1016/j.media.2024.103120. Epub 2024 Feb 23.
利手性、语言区与神经精神疾病:来自脑影像与遗传学的新见解。
Brain. 2019 Oct 1;142(10):2938-2947. doi: 10.1093/brain/awz257.
4
Quantifying performance of machine learning methods for neuroimaging data.量化机器学习方法在神经影像学数据中的性能。
Neuroimage. 2019 Oct 1;199:351-365. doi: 10.1016/j.neuroimage.2019.05.082. Epub 2019 Jun 5.
5
Resting brain dynamics at different timescales capture distinct aspects of human behavior.静息态脑动力学在不同时间尺度上捕捉到人类行为的不同方面。
Nat Commun. 2019 May 24;10(1):2317. doi: 10.1038/s41467-019-10317-7.
6
Hypertension Is Associated with White Matter Disruption in Apparently Healthy Middle-Aged Individuals.高血压与健康中年个体的脑白质破坏有关。
AJNR Am J Neuroradiol. 2018 Dec;39(12):2243-2248. doi: 10.3174/ajnr.A5871. Epub 2018 Nov 15.
7
Genome-wide association studies of brain imaging phenotypes in UK Biobank.全基因组关联研究对英国生物库脑影像表型的影响。
Nature. 2018 Oct;562(7726):210-216. doi: 10.1038/s41586-018-0571-7. Epub 2018 Oct 10.
8
Multimodal Structural Neuroimaging Markers of Brain Development and ADHD Symptoms.多模态结构神经影像学标志物与大脑发育和 ADHD 症状。
Am J Psychiatry. 2019 Jan 1;176(1):57-66. doi: 10.1176/appi.ajp.2018.18010034. Epub 2018 Sep 17.
9
Recursive Nearest Agglomeration (ReNA): Fast Clustering for Approximation of Structured Signals.递归最近凝聚法(ReNA):用于结构化信号逼近的快速聚类
IEEE Trans Pattern Anal Mach Intell. 2019 Mar;41(3):669-681. doi: 10.1109/TPAMI.2018.2815524. Epub 2018 Mar 13.
10
Spatial Topography of Individual-Specific Cortical Networks Predicts Human Cognition, Personality, and Emotion.个体特定皮质网络的空间拓扑结构预测人类认知、个性和情绪。
Cereb Cortex. 2019 Jun 1;29(6):2533-2551. doi: 10.1093/cercor/bhy123.