Arias-Londono Julian D, Gomez-Garcia Jorge A, Moro-Velazquez Laureano, Godino-Llorente Juan I
Department of Systems EngineeringUniversidad de Antioquia Medellín 050010 Colombia.
Bioengineering and Optoelectronics Laboratory (ByO)Universidad Politécnica de Madrid 28031 Madrid Spain.
IEEE Access. 2020 Dec 14;8:226811-226827. doi: 10.1109/ACCESS.2020.3044858. eCollection 2020.
Current standard protocols used in the clinic for diagnosing COVID-19 include molecular or antigen tests, generally complemented by a plain chest X-Ray. The combined analysis aims to reduce the significant number of false negatives of these tests and provide complementary evidence about the presence and severity of the disease. However, the procedure is not free of errors, and the interpretation of the chest X-Ray is only restricted to radiologists due to its complexity. With the long term goal to provide new evidence for the diagnosis, this paper presents an evaluation of different methods based on a deep neural network. These are the first steps to develop an automatic COVID-19 diagnosis tool using chest X-Ray images to differentiate between controls, pneumonia, or COVID-19 groups. The paper describes the process followed to train a Convolutional Neural Network with a dataset of more than 79, 500 X-Ray images compiled from different sources, including more than 8, 500 COVID-19 examples. Three different experiments following three preprocessing schemes are carried out to evaluate and compare the developed models. The aim is to evaluate how preprocessing the data affects the results and improves its explainability. Likewise, a critical analysis of different variability issues that might compromise the system and its effects is performed. With the employed methodology, a 91.5% classification accuracy is obtained, with an 87.4% average recall for the worst but most explainable experiment, which requires a previous automatic segmentation of the lung region.
目前临床上用于诊断新冠肺炎的标准方案包括分子检测或抗原检测,通常辅以胸部X光平片。联合分析旨在减少这些检测中大量的假阴性结果,并提供关于疾病存在和严重程度的补充证据。然而,该程序并非没有错误,而且由于其复杂性,胸部X光片的解读仅由放射科医生进行。为了为诊断提供新证据这一长期目标,本文对基于深度神经网络的不同方法进行了评估。这些是开发一种使用胸部X光图像来区分对照组、肺炎组或新冠肺炎组的自动新冠肺炎诊断工具的第一步。本文描述了使用从不同来源收集的超过79,500张X光图像数据集(包括超过8,500个新冠肺炎病例)训练卷积神经网络的过程。按照三种预处理方案进行了三个不同的实验,以评估和比较所开发的模型。目的是评估数据预处理如何影响结果并提高其可解释性。同样,对可能影响系统及其效果的不同变异性问题进行了批判性分析。采用所使用的方法,获得了91.5%的分类准确率,对于最差但最具可解释性的实验,平均召回率为87.4%,该实验需要对肺区域进行先前的自动分割。