Wu Zeng-Hong, Li Zi-Wei, Yang Dong-Liang, Liu Jia
Department of Infectious Diseases, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
Front Cell Dev Biol. 2021 Nov 15;9:713925. doi: 10.3389/fcell.2021.713925. eCollection 2021.
Hepatocellular carcinoma (HCC) is a highly aggressive malignant disease, and numerous studies have demonstrated that an inflammatory environment can induce normal cells to transform into cancerous. We integrated genomic data to comprehensively assess the association between pyroptosis and tumor microenvironment (TME) cell-infiltrating characteristics in HCC, as well as the potential molecular function and clinical significance of lncRNA. The analysis of CNV alteration frequency displayed that CNV changes were common in 33 PRGs, and most were focused on copy number amplification. As a result of lasso regression analysis, nine differentially expressed lncRNAs (AL031985.3, NRAV, OSMR-AS1, AC073611.1, MKLN1-AS, AL137186.2, AL049840.4, MIR4435-2HG, and AL118511.1) were selected as independent prognosis factors of HCC patients. Patients at high risk have poorer survival than those in the low-risk group in training and testing cohorts. A low-risk score was significantly associated with an IC50 of chemotherapeutics such as bortezomib ( < 0.001), but a high-risk score was significantly linked to docetaxel ( < 0.001), implying that signature served as a prospective predictor for chemosensitivity. This work suggests pyroptosis-related lncRNAs features and their potential mechanisms on tumor microenvironment. The exploration may assist in identifying novel biomarkers and assist patients in predicting their prognosis, clinical diagnosis, and management.
肝细胞癌(HCC)是一种侵袭性很强的恶性疾病,大量研究表明,炎症环境可诱导正常细胞发生癌变。我们整合基因组数据,以全面评估HCC中细胞焦亡与肿瘤微环境(TME)细胞浸润特征之间的关联,以及长链非编码RNA(lncRNA)的潜在分子功能和临床意义。CNV改变频率分析显示,33个程序性死亡相关基因(PRG)中常见CNV变化,且大多数集中在拷贝数扩增。经套索回归分析,九个差异表达的lncRNA(AL031985.3、NRAV、OSMR-AS1、AC073611.1、MKLN1-AS、AL137186.2、AL049840.4、MIR4435-2HG和AL118511.1)被选为HCC患者的独立预后因素。在训练和测试队列中,高风险患者的生存率低于低风险组。低风险评分与硼替佐米等化疗药物的IC50显著相关(<0.001),但高风险评分与多西他赛显著相关(<0.001),这意味着该特征可作为化疗敏感性的前瞻性预测指标。这项工作揭示了细胞焦亡相关lncRNA的特征及其对肿瘤微环境的潜在作用机制。该探索可能有助于识别新的生物标志物,并帮助患者预测其预后、临床诊断和治疗。