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Machine learning in health care and laboratory medicine: General overview of supervised learning and Auto-ML.医疗保健与检验医学中的机器学习:监督学习和自动机器学习概述
Int J Lab Hematol. 2021 Jul;43 Suppl 1:15-22. doi: 10.1111/ijlh.13537.
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Discriminating Bacterial and Viral Infection Using a Rapid Host Gene Expression Test.使用快速宿主基因表达检测区分细菌和病毒感染。
Crit Care Med. 2021 Oct 1;49(10):1651-1663. doi: 10.1097/CCM.0000000000005085.
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Gene Expression-Based Diagnosis of Infections in Critically Ill Patients-Prospective Validation of the SepsisMetaScore in a Longitudinal Severe Trauma Cohort.基于基因表达的危重症患者感染诊断-脓毒症 MetaScore 在纵向严重创伤队列中的前瞻性验证。
Crit Care Med. 2021 Aug 1;49(8):e751-e760. doi: 10.1097/CCM.0000000000005027.
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Novel application of automated machine learning with MALDI-TOF-MS for rapid high-throughput screening of COVID-19: a proof of concept.基于 MALDI-TOF-MS 的自动化机器学习在 COVID-19 快速高通量筛选中的新应用:概念验证。
Sci Rep. 2021 Apr 15;11(1):8219. doi: 10.1038/s41598-021-87463-w.
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Artificial intelligence in sepsis early prediction and diagnosis using unstructured data in healthcare.人工智能在使用医疗保健中的非结构化数据进行脓毒症早期预测和诊断中的应用。
Nat Commun. 2021 Jan 29;12(1):711. doi: 10.1038/s41467-021-20910-4.
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Pilot Study Using Machine Learning to Identify Immune Profiles for the Prediction of Early Virological Relapse After Stopping Nucleos(t)ide Analogues in HBeAg-Negative CHB.基于机器学习的免疫特征识别预测 HBeAg 阴性慢性乙型肝炎患者停止核苷(酸)类似物后早期病毒学复发的初步研究。
Hepatol Commun. 2020 Nov 5;5(1):97-111. doi: 10.1002/hep4.1626. eCollection 2021 Jan.
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SARS-CoV-2 Transmission From People Without COVID-19 Symptoms.SARS-CoV-2 从无 COVID-19 症状者传播。
JAMA Netw Open. 2021 Jan 4;4(1):e2035057. doi: 10.1001/jamanetworkopen.2020.35057.
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Use of Diabetes-Related Applications and Digital Health Tools by People With Diabetes and Their Health Care Providers.糖尿病患者及其医疗服务提供者对糖尿病相关应用程序和数字健康工具的使用情况。
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A Multi-mRNA Host-Response Molecular Blood Test for the Diagnosis and Prognosis of Acute Infections and Sepsis: Proceedings from a Clinical Advisory Panel.用于急性感染和脓毒症诊断及预后评估的多信使核糖核酸宿主反应分子血液检测:临床咨询小组会议纪要
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Clinical Performance of the Point-of-Care cobas Liat for Detection of SARS-CoV-2 in 20 Minutes: a Multicenter Study.即时检测 cobas Liat 检测 SARS-CoV-2 的临床性能:一项多中心研究。
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人工智能和机器学习在传染病检测中的应用不断发展。

Evolving Applications of Artificial Intelligence and Machine Learning in Infectious Diseases Testing.

机构信息

Department of Pathology and Laboratory Medicine, UC Davis School of Medicine, CA.

Department of Emergency Medicine, UC Davis School of Medicine, CA.

出版信息

Clin Chem. 2021 Dec 30;68(1):125-133. doi: 10.1093/clinchem/hvab239.

DOI:10.1093/clinchem/hvab239
PMID:34969102
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9383167/
Abstract

BACKGROUND

Artificial intelligence (AI) and machine learning (ML) are poised to transform infectious disease testing. Uniquely, infectious disease testing is technologically diverse spaces in laboratory medicine, where multiple platforms and approaches may be required to support clinical decision-making. Despite advances in laboratory informatics, the vast array of infectious disease data is constrained by human analytical limitations. Machine learning can exploit multiple data streams, including but not limited to laboratory information and overcome human limitations to provide physicians with predictive and actionable results. As a quickly evolving area of computer science, laboratory professionals should become aware of AI/ML applications for infectious disease testing as more platforms are become commercially available.

CONTENT

In this review we: (a) define both AI/ML, (b) provide an overview of common ML approaches used in laboratory medicine, (c) describe the current AI/ML landscape as it relates infectious disease testing, and (d) discuss the future evolution AI/ML for infectious disease testing in both laboratory and point-of-care applications.

SUMMARY

The review provides an important educational overview of AI/ML technique in the context of infectious disease testing. This includes supervised ML approaches, which are frequently used in laboratory medicine applications including infectious diseases, such as COVID-19, sepsis, hepatitis, malaria, meningitis, Lyme disease, and tuberculosis. We also apply the concept of "data fusion" describing the future of laboratory testing where multiple data streams are integrated by AI/ML to provide actionable clinical knowledge.

摘要

背景

人工智能(AI)和机器学习(ML)有望改变传染病检测。独特的是,传染病检测是实验室医学中技术多样化的领域,需要多种平台和方法来支持临床决策。尽管实验室信息学取得了进步,但大量的传染病数据受到人类分析能力的限制。机器学习可以利用多种数据流,包括但不限于实验室信息,并克服人类的局限性,为医生提供预测性和可操作的结果。作为计算机科学中一个快速发展的领域,随着越来越多的平台商业化,实验室专业人员应该了解 AI/ML 在传染病检测中的应用。

内容

在这篇综述中,我们:(a)定义了 AI/ML;(b)概述了实验室医学中常用的 ML 方法;(c)描述了与传染病检测相关的当前 AI/ML 领域;(d)讨论了 AI/ML 在实验室和即时检测应用中用于传染病检测的未来发展。

总结

这篇综述在传染病检测的背景下提供了 AI/ML 技术的重要教育概述。这包括监督 ML 方法,这些方法在包括 COVID-19、败血症、肝炎、疟疾、脑膜炎、莱姆病和结核病在内的传染病等实验室医学应用中经常使用。我们还应用了“数据融合”的概念,描述了实验室检测的未来,即通过 AI/ML 整合多个数据流以提供可操作的临床知识。