Key Laboratory of Forestry Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China.
Int J Mol Sci. 2022 Oct 30;23(21):13215. doi: 10.3390/ijms232113215.
Transcription factors (TFs) are a class of proteins that play an important regulatory role in controlling the expression of plant target genes by interacting with downstream regulatory genes. The lateral organ boundary (LOB) structural domain () genes are a family of genes encoding plant-specific transcription factors that play important roles in regulating plant growth and development, nutrient metabolism, and environmental stresses. However, the gene family has not been systematically identified in , one of the most important conifers in southern China. Therefore, in this study, we combined cell biology and bioinformatics approaches to identify the gene family of by systematic gene structure and functional evolutionary analysis. We obtained 47 gene family members, and all members can be divided into two subfamilies, (Class I and Class II). By treating the plants with abiotic stress and growth hormone, etc., under qPCR-based analysis, we found that the expression of genes was regulated by growth hormone and abiotic stress treatments, and thus this gene family in growth and development may be actively involved in plant growth and development and responses to adversity stress, etc. By subcellular localization analysis, PmLBD is a nuclear protein, and two of the genes, and , were selected for functional characterization; secondly, yeast self-activation analysis showed that , , and had no self-activating activity. This study lays the foundation for an in-depth study of the role of the gene family in other physiological activities of .
转录因子(TFs)是一类蛋白质,通过与下游调控基因相互作用,在控制植物靶基因的表达方面发挥重要的调控作用。侧生器官边界(LOB)结构域()基因是一类编码植物特异性转录因子的基因家族,在调节植物生长发育、养分代谢和环境胁迫等方面发挥着重要作用。然而,在南方最重要的针叶树之一的中国南部松中,该基因家族尚未得到系统的鉴定。因此,在这项研究中,我们结合细胞生物学和生物信息学方法,通过系统的基因结构和功能进化分析,鉴定了中国南部松的 基因家族。我们获得了 47 个基因家族成员,所有成员都可以分为两个亚家族(I 类和 II 类)。通过基于 qPCR 的分析对植物进行非生物胁迫和生长激素等处理,我们发现基因的表达受到生长激素和非生物胁迫处理的调节,因此该基因家族在生长发育中可能积极参与植物的生长发育和对逆境胁迫的响应等过程。通过亚细胞定位分析,PmLBD 是一种核蛋白,我们选择了两个基因、和,进行功能表征;其次,酵母自激活分析表明、、和没有自激活活性。本研究为深入研究基因家族在其他生理活动中的作用奠定了基础。