Yao Dongren, Sui Jing, Yang Erkun, Yap Pew-Thian, Shen Dinggang, Liu Mingxia
Brainentome Center and National Laboratory of Pattern Recognition, Institute of Automation, Chinese Academy of Sciences, Beijing 100190, China.
University of Chinese Academy of Sciences, Beijing 100049, China.
Mach Learn Med Imaging. 2020 Oct;12436:1-10. doi: 10.1007/978-3-030-59861-7_1. Epub 2020 Sep 29.
Extensive studies focus on analyzing human brain functional connectivity from a network perspective, in which each network contains complex graph structures. Based on resting-state functional MRI (rs-fMRI) data, graph convolutional networks (GCNs) enable comprehensive mapping of brain functional connectivity (FC) patterns to depict brain activities. However, existing studies usually characterize static properties of the FC patterns, ignoring the time-varying dynamic information. In addition, previous GCN methods generally use fixed group-level (e.g., patients or controls) representation of FC networks, and thus, cannot capture subject-level FC specificity. To this end, we propose a Temporal-Adaptive GCN (TAGCN) framework that can not only take advantage of both spatial and temporal information using resting-state FC patterns and time-series but also explicitly characterize subject-level specificity of FC patterns. Specifically, we first segment each ROI-based time-series into multiple overlapping windows, then employ an adaptive GCN to mine topological information. We further model the temporal patterns for each ROI along time to learn the periodic brain status changes. Experimental results on 533 major depressive disorder (MDD) and health control (HC) subjects demonstrate that the proposed TAGCN outperforms several state-of-the-art methods in MDD vs. HC classification, and also can be used to capture dynamic FC alterations and learn valid graph representations.
大量研究聚焦于从网络角度分析人类大脑功能连接,其中每个网络都包含复杂的图结构。基于静息态功能磁共振成像(rs-fMRI)数据,图卷积网络(GCN)能够全面映射大脑功能连接(FC)模式以描绘大脑活动。然而,现有研究通常表征FC模式的静态属性,忽略了时变动态信息。此外,先前的GCN方法通常使用FC网络的固定组级(例如患者或对照)表示,因此无法捕捉个体水平的FC特异性。为此,我们提出了一种时间自适应GCN(TAGCN)框架,它不仅可以利用静息态FC模式和时间序列的空间和时间信息,还能明确地表征FC模式的个体水平特异性。具体而言,我们首先将每个基于感兴趣区域(ROI)的时间序列分割成多个重叠窗口,然后采用自适应GCN挖掘拓扑信息。我们进一步对每个ROI随时间的时间模式进行建模,以了解周期性的大脑状态变化。对533名重度抑郁症(MDD)患者和健康对照(HC)受试者的实验结果表明,所提出的TAGCN在MDD与HC分类方面优于几种先进方法,并且还可用于捕捉动态FC改变并学习有效的图表示。