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细胞生物学中的代谢组学

Metabolomics in Cell Biology.

作者信息

Eraslan Zuhal, Cascante Marta, Günther Ulrich L

机构信息

Department of Dermatology, Weill Cornell Medicine, New York, NY, USA.

Department of Biochemistry and Molecular Biomedicine, University of Barcelona, Barcelona, Spain.

出版信息

Handb Exp Pharmacol. 2023;277:181-207. doi: 10.1007/164_2022_619.

Abstract

Metabolomics has long been used in a biomedical context. The most typical samples are body fluids in which small molecules can be detected and quantified using technologies such as Nuclear Magnetic Resonance (NMR) and Mass Spectrometry (MS). Many studies, in particular in the wider field of cancer research, are based on cellular models. Different cancer cells can have vastly different ways of regulating metabolism and responses to drug treatments depend on specific metabolic mechanisms which are often cell type specific. This has led to a series of publications using metabolomics to study metabolic mechanisms. Cell-based metabolomics has specific requirements and allows for interesting approaches where metabolism is followed in real-time. Here applications of metabolomics in cell biology have been reviewed, providing insight into specific technologies used and showing exemplary case studies with an emphasis towards applications which help to understand drug mechanisms.

摘要

代谢组学长期以来一直应用于生物医学领域。最典型的样本是体液,其中的小分子可以使用核磁共振(NMR)和质谱(MS)等技术进行检测和定量。许多研究,特别是在更广泛的癌症研究领域,都是基于细胞模型。不同的癌细胞在调节代谢方面可能有很大差异,对药物治疗的反应取决于特定的代谢机制,而这些机制通常具有细胞类型特异性。这导致了一系列使用代谢组学研究代谢机制的出版物。基于细胞的代谢组学有特定要求,并允许采用有趣的方法来实时跟踪代谢。本文综述了代谢组学在细胞生物学中的应用,深入了解了所使用的特定技术,并展示了一些典型案例研究,重点是有助于理解药物机制的应用。

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