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汞替代对核酸杂交特性的影响。

The effects of mercury-substitution on the hybridisation characteristics of nucleic acids.

作者信息

Brown T D, Balmain A

出版信息

Nucleic Acids Res. 1979 Dec 20;7(8):2357-68. doi: 10.1093/nar/7.8.2357.

DOI:10.1093/nar/7.8.2357
PMID:392470
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC342389/
Abstract

The effect of different levels of mercury substitution on the rate and extent of hybridisation of globin mRNA with a complementary DNA (cDNA) copy has been investigated. It was found that mercuration significantly reduces both the rate of hybridisation and the extent of the reaction, but that these effects are abolished when at least stoichiometric amounts of 2-mercaptoethanol are included in the hybridisation medium. As a preliminary to using this technique to isolate specific groups of sequences after long-term hybridisations, we have investigated both the rate of demercuration of RNA and its retention on thiol-sepharose columns after extended incubation under commonly employed hybridisation conditions at 43 degrees or 60 degrees. Retention was essentially quantitative even after incubation times of 300 hours at 43 degrees, but decreased significantly after 48 hours at 60 degrees. It is concluded that thiol-sepharose chromatography offers considerable advantages over hydroxyapatite chromatography for the recovery of hybridised sequences, particularly with regard to the lower levels of non-specific binding obtained and its ability to distinguish directly between DNA-DNA and DNA-Hg RNA hybrids.

摘要

研究了不同汞取代水平对珠蛋白mRNA与互补DNA(cDNA)拷贝杂交速率和程度的影响。发现汞化显著降低了杂交速率和反应程度,但当杂交介质中至少包含化学计量的2-巯基乙醇时,这些影响就会消除。作为在长期杂交后使用该技术分离特定序列组的初步研究,我们研究了在43℃或60℃常用杂交条件下长时间孵育后RNA的脱汞速率及其在硫醇-琼脂糖柱上的保留情况。即使在43℃孵育300小时后,保留率基本也是定量的,但在60℃孵育48小时后显著下降。得出的结论是,对于杂交序列的回收,硫醇-琼脂糖色谱法比羟基磷灰石色谱法具有相当大的优势,特别是在获得较低水平的非特异性结合以及直接区分DNA-DNA和DNA-Hg RNA杂交体的能力方面。

相似文献

1
The effects of mercury-substitution on the hybridisation characteristics of nucleic acids.汞替代对核酸杂交特性的影响。
Nucleic Acids Res. 1979 Dec 20;7(8):2357-68. doi: 10.1093/nar/7.8.2357.
2
The divergence between human and baboon globin genes.人类和狒狒珠蛋白基因之间的差异。
Biochim Biophys Acta. 1976 Jun 2;435(1):76-81. doi: 10.1016/0005-2787(76)90193-3.
3
Chicken globin gene number.鸡珠蛋白基因数量。
Nucleic Acids Res. 1976 Aug;3(8):2019-26. doi: 10.1093/nar/3.8.2019.
4
Is there specific transcription from isolated chromatin?从分离的染色质中是否存在特异性转录?
Nucleic Acids Res. 1978 Apr;5(4):1237-52. doi: 10.1093/nar/5.4.1237.
5
In vitro transcription of chromatin in the presence of a mercurated nucleotide.在含有汞化核苷酸的情况下对染色质进行体外转录。
Proc Natl Acad Sci U S A. 1976 May;73(5):1564-7. doi: 10.1073/pnas.73.5.1564.
6
The DNA-RNA hybridisation of ( 3 H) methylated mouse-globin mRNA in conditions of RNA excess.在RNA过量条件下(³H)甲基化小鼠珠蛋白mRNA的DNA-RNA杂交
Eur J Biochem. 1972 May;27(1):1-9. doi: 10.1111/j.1432-1033.1972.tb01803.x.
7
Analysis of in vitro transcription of duck reticulocyte chromatin using mercury-substituted ribonucleoside triphosphates.使用汞取代的三磷酸核糖核苷对鸭网织红细胞染色质进行体外转录分析。
Biochemistry. 1977 Nov 15;16(23):5135-45. doi: 10.1021/bi00642a029.
8
A nuclear precursor to human gamma-globin messenger RNA.人类γ-珠蛋白信使核糖核酸的一种核前体。
Nucleic Acids Res. 1979 Nov 10;7(5):1121-30. doi: 10.1093/nar/7.5.1121.
9
Isolation of globin pre-messenger RNA on thiol-agarose by terminally mercurated complementary DNA.通过末端汞化互补DNA在硫醇琼脂糖上分离珠蛋白前体信使RNA。
Mol Biol Rep. 1981 May 22;7(1-3):83-92. doi: 10.1007/BF00778737.
10
Human globin gene analysis for a patient with beta-o/delta beta-thalassemia.对一名β⁰/δβ地中海贫血患者进行的人类珠蛋白基因分析。
Proc Natl Acad Sci U S A. 1975 Jun;72(6):2294-9. doi: 10.1073/pnas.72.6.2294.

引用本文的文献

1
Frequency distribution of pre-messenger RNA sequences in polyadenylated and non-polyadenylated nuclear RNA from Friend cells.来自弗瑞德(Friend)细胞的多聚腺苷酸化和非多聚腺苷酸化核RNA中前体信使RNA序列的频率分布。
Nucleic Acids Res. 1980 Apr 11;8(7):1643-60. doi: 10.1093/nar/8.7.1643.
2
Cloning and characterisation of the abundant cytoplasmic 7S RNA from mouse cells.小鼠细胞中丰富的细胞质7S RNA的克隆与特性分析
Nucleic Acids Res. 1982 Jul 24;10(14):4259-77. doi: 10.1093/nar/10.14.4259.
3
Changes induced in rat liver polysomal polyadenylated RNAs by depletion of circulating glucocorticoids.循环糖皮质激素耗竭对大鼠肝脏多聚核糖体多聚腺苷酸化RNA的影响。
Nucleic Acids Res. 1982 Jun 11;10(11):3541-60. doi: 10.1093/nar/10.11.3541.
4
The appearance of new polyadenylated nuclear RNA sequences during rat-liver regeneration.大鼠肝脏再生过程中新的聚腺苷酸化核RNA序列的出现。
Nucleic Acids Res. 1981 Apr 24;9(8):2021-35. doi: 10.1093/nar/9.8.2021.
5
A non-radioactive in situ hybridization method based on mercurated nucleic acid probes and sulfhydryl-hapten ligands.
Nucleic Acids Res. 1986 Aug 26;14(16):6471-88. doi: 10.1093/nar/14.16.6471.
6
A new hybridocytochemical method based on mercurated nucleic acid probes and sulfhydryl-hapten ligands. I. Stability of the mercury-sulfhydryl bond and influence of the ligand structure on immunochemical detection of the hapten.一种基于汞化核酸探针和巯基半抗原配体的新型杂交细胞化学方法。I. 汞-巯基键的稳定性及配体结构对半抗原免疫化学检测的影响。
Histochemistry. 1986;84(2):169-78. doi: 10.1007/BF00499829.

本文引用的文献

1
Globin messenger RNA synthesis and processing during haemoglobin induction in Friend cells. II. Evidence for post-transcriptional control in clone 707.弗氏细胞血红蛋白诱导过程中的珠蛋白信使核糖核酸合成与加工。II. 克隆707中转录后调控的证据。
Cell Differ. 1974 Jun;3(1):23-30. doi: 10.1016/0045-6039(74)90037-2.
2
The diversity of the messenger RNA population in growing Friend cells.生长中的弗瑞德细胞中信使RNA群体的多样性。
Cell Differ. 1974 Nov;3(4):221-32. doi: 10.1016/0045-6039(74)90005-0.
3
Direct covalent mercuration of nucleotides and polynucleotides.核苷酸和多核苷酸的直接共价汞化。
Biochemistry. 1975 Jun 3;14(11):2447-57. doi: 10.1021/bi00682a027.
4
Complexity and specificity of polysomal poly(A+) RNA in mouse tissues.小鼠组织中多聚核糖体多聚腺苷酸(A+)RNA的复杂性和特异性
Biochemistry. 1976 Jun 29;15(13):2823-9. doi: 10.1021/bi00658a019.
5
The use of mercurated nucleoside triphosphate as a probe in transcription studies in vitro.用汞化核苷三磷酸作为体外转录研究中的探针。
Eur J Biochem. 1976 Jul 15;66(3):543-50. doi: 10.1111/j.1432-1033.1976.tb10580.x.
6
Comparison of the base-sequence complexities of polysomal and nuclear RNAs in growing Friend erythroleukemia cells.生长中的弗瑞德红白血病细胞中多聚核糖体RNA和核RNA碱基序列复杂性的比较。
Biochemistry. 1977 Mar 22;16(6):1218-23. doi: 10.1021/bi00625a029.
7
Purification of specific DNA sequences by sulfhydryl-Sepharose chromatography of mercurated polynucleotides.通过汞化多核苷酸的巯基-琼脂糖凝胶色谱法纯化特定DNA序列
J Biol Chem. 1978 Oct 25;253(20):7500-7.
8
Analysis of in vitro transcription of duck reticulocyte chromatin using mercury-substituted ribonucleoside triphosphates.使用汞取代的三磷酸核糖核苷对鸭网织红细胞染色质进行体外转录分析。
Biochemistry. 1977 Nov 15;16(23):5135-45. doi: 10.1021/bi00642a029.
9
Mercurated polynucleotides: new probes for hybridization and selective polymer fractionation.汞化多核苷酸:用于杂交和选择性聚合物分级分离的新型探针。
Biochemistry. 1975 Jun 3;14(11):2458-69. doi: 10.1021/bi00682a028.