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受图像超分辨率启发的电子密度预测

Image super-resolution inspired electron density prediction.

作者信息

Li Chenghan, Sharir Or, Yuan Shunyue, Chan Garnet Kin-Lic

机构信息

Division of Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, 91125, CA, USA.

Division of Engineering and Applied Sciences, California Institute of Technology, Pasadena, 91125, CA, USA.

出版信息

Nat Commun. 2025 May 23;16(1):4811. doi: 10.1038/s41467-025-60095-8.

Abstract

Predicting ground-state electron densities of chemical systems has recently received growing attention in machine learning quantum chemistry, given their fundamental importance as highlighted by the Hohenberg-Kohn theorem. Drawing inspiration from the domain of image super-resolution, we view the electron density as a 3D grayscale image and use a convolutional residual network to transform a crude and trivially generated guess of the molecular density into an accurate ground-state quantum mechanical density. Here we show that this model produces more accurate predictions than all prior density prediction approaches. Due to its simplicity, the model is directly applicable to unseen molecular conformations and chemical elements. We show that fine-tuning on limited new data provides high accuracy even in challenging cases of exotic elements and charge states.

摘要

鉴于基态电子密度在化学系统中的重要性已被 Hohenberg-Kohn 定理所强调,预测化学系统的基态电子密度最近在机器学习量子化学领域受到了越来越多的关注。我们从图像超分辨率领域汲取灵感,将电子密度视为三维灰度图像,并使用卷积残差网络将粗糙且简单生成的分子密度猜测转换为精确的基态量子力学密度。在此我们表明,该模型比所有先前的密度预测方法都能产生更准确的预测。由于其简单性,该模型可直接应用于未见的分子构象和化学元素。我们表明,即使在涉及奇异元素和电荷态的具有挑战性的情况下,在有限的新数据上进行微调也能提供高精度。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0060/12102193/735463298efb/41467_2025_60095_Fig1_HTML.jpg

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