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一个用于搜索转运RNA基因的计算机程序。

A computer program to search for tRNA genes.

作者信息

Staden R

出版信息

Nucleic Acids Res. 1980 Feb 25;8(4):817-25.

Abstract

This paper describes a computer program that can find tRNA genes within long DNA sequences. The program obviates the need to map the tRNA genes.

摘要

本文描述了一种能够在长DNA序列中找到tRNA基因的计算机程序。该程序无需对tRNA基因进行定位。

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引用本文的文献

1
Nucleotide sequences of transfer RNA genes in the Pisum sativum chloroplast DNA.
Plant Mol Biol. 1986 Jan;6(1):1-12. doi: 10.1007/BF00021301.
2
The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression.
EMBO J. 1986 Sep;5(9):2043-2049. doi: 10.1002/j.1460-2075.1986.tb04464.x.
3
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.
Nucleic Acids Res. 1997 Mar 1;25(5):955-64. doi: 10.1093/nar/25.5.955.
4
Characterization of a large chromosomal "high-pathogenicity island" in biotype 1B Yersinia enterocolitica.
J Bacteriol. 1996 Dec;178(23):6743-51. doi: 10.1128/jb.178.23.6743-6751.1996.
5
The Staden sequence analysis package.
Mol Biotechnol. 1996 Jun;5(3):233-41. doi: 10.1007/BF02900361.
7
RNA sequence analysis using covariance models.
Nucleic Acids Res. 1994 Jun 11;22(11):2079-88. doi: 10.1093/nar/22.11.2079.
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Characterization of two minicircular plasmid-like DNAs isolated from date-palm mitochondria.
Curr Genet. 1994 Nov-Dec;26(5-6):535-41. doi: 10.1007/BF00309946.
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Nucleotide sequence of a nuclear tRNA(Gly) (GCC) gene of a higher plant, Ragi (Eleucine coracana).
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Stochastic context-free grammars for tRNA modeling.
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本文引用的文献

1
Further procedures for sequence analysis by computer.
Nucleic Acids Res. 1978 Mar;5(3):1013-6. doi: 10.1093/nar/5.3.1013.
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Nucleic Acids Res. 1977 Nov;4(11):4037-51. doi: 10.1093/nar/4.11.4037.
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Nucleic Acids Res. 1979 Sep 25;7(2):529-45. doi: 10.1093/nar/7.2.529.
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A strategy of DNA sequencing employing computer programs.
Nucleic Acids Res. 1979 Jun 11;6(7):2601-10. doi: 10.1093/nar/6.7.2601.
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Compilation of tRNA sequences.
Nucleic Acids Res. 1979 Jan;6(1):r1-r19.
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A precursor to a minor species of yeast tRNASer contains an intervening sequence.
Cell. 1979 Sep;18(1):11-26. doi: 10.1016/0092-8674(79)90349-0.
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Structure of yeast phenylalanine-tRNA genes: an intervening DNA segment within the region coding for the tRNA.
Proc Natl Acad Sci U S A. 1978 Jan;75(1):190-4. doi: 10.1073/pnas.75.1.190.
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Nucleotide sequence of a mutant eukaryotic gene: the yeast tyrosine-inserting ochre suppressor SUP4-o.
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5453-7. doi: 10.1073/pnas.74.12.5453.

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