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一种采用计算机程序的DNA测序策略。

A strategy of DNA sequencing employing computer programs.

作者信息

Staden R

出版信息

Nucleic Acids Res. 1979 Jun 11;6(7):2601-10. doi: 10.1093/nar/6.7.2601.

Abstract

With modern fast sequencing techniques and suitable computer programs it is now possible to sequence whole genomes without the need of restriction maps. This paper describes computer programs that can be used to order both sequence gel readings and clones. A method of coding for uncertainties in gel readings is described. These programs are available on request.

摘要

借助现代快速测序技术和合适的计算机程序,现在无需限制图谱就能对整个基因组进行测序。本文描述了可用于对序列凝胶读数和克隆进行排序的计算机程序。还描述了一种对凝胶读数中的不确定性进行编码的方法。这些程序可应要求提供。

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本文引用的文献

1
A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase.
J Mol Biol. 1975 May 25;94(3):441-8. doi: 10.1016/0022-2836(75)90213-2.
2
Nucleotide sequence of bacteriophage phi X174 DNA.
Nature. 1977 Feb 24;265(5596):687-95. doi: 10.1038/265687a0.
3
Nucleotide sequence of bacteriophage G4 DNA.
Nature. 1978 Nov 16;276(5685):236-47. doi: 10.1038/276236a0.
4
Further procedures for sequence analysis by computer.
Nucleic Acids Res. 1978 Mar;5(3):1013-6. doi: 10.1093/nar/5.3.1013.
5
The use of thin acrylamide gels for DNA sequencing.
FEBS Lett. 1978 Mar 1;87(1):107-10. doi: 10.1016/0014-5793(78)80145-8.
6
Sequence data handling by computer.
Nucleic Acids Res. 1977 Nov;4(11):4037-51. doi: 10.1093/nar/4.11.4037.
7
DNA sequencing with chain-terminating inhibitors.
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7. doi: 10.1073/pnas.74.12.5463.
8
A new method for sequencing DNA.
Proc Natl Acad Sci U S A. 1977 Feb;74(2):560-4. doi: 10.1073/pnas.74.2.560.

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