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酿酒酵母第四条染色体的核苷酸序列。

The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.

作者信息

Jacq C, Alt-Mörbe J, Andre B, Arnold W, Bahr A, Ballesta J P, Bargues M, Baron L, Becker A, Biteau N, Blöcker H, Blugeon C, Boskovic J, Brandt P, Brückner M, Buitrago M J, Coster F, Delaveau T, del Rey F, Dujon B, Eide L G, Garcia-Cantalejo J M, Goffeau A, Gomez-Peris A, Zaccaria P

机构信息

Laboratoire de Génétique Moléculaire, URA 1302 du CNRS, Ecole Normale Supérieure, Paris, France.

出版信息

Nature. 1997 May 29;387(6632 Suppl):75-8.

PMID:9169867
Abstract

The complete DNA sequence of the yeast Saccharomyces cerevisiae chromosome IV has been determined. Apart from chromosome XII, which contains the 1-2 Mb rDNA cluster, chromosome IV is the longest S. cerevisiae chromosome. It was split into three parts, which were sequenced by a consortium from the European Community, the Sanger Centre, and groups from St Louis and Stanford in the United States. The sequence of 1,531,974 base pairs contains 796 predicted or known genes, 318 (39.9%) of which have been previously identified. Of the 478 new genes, 225 (28.3%) are homologous to previously identified genes and 253 (32%) have unknown functions or correspond to spurious open reading frames (ORFs). On average there is one gene approximately every two kilobases. Superimposed on alternating regional variations in G+C composition, there is a large central domain with a lower G+C content that contains all the yeast transposon (Ty) elements and most of the tRNA genes. Chromosome IV shares with chromosomes II, V, XII, XIII and XV some long clustered duplications which partly explain its origin.

摘要

酿酒酵母第四条染色体的完整DNA序列已被测定。除了包含1-2 Mb核糖体DNA簇的第十二条染色体外,第四条染色体是酿酒酵母最长的染色体。它被分成三个部分,由欧洲共同体的一个财团、桑格中心以及美国圣路易斯和斯坦福的研究小组进行测序。1531974个碱基对的序列包含796个预测或已知基因,其中318个(39.9%)先前已被鉴定。在478个新基因中,225个(28.3%)与先前鉴定的基因同源,253个(32%)功能未知或对应于假开放阅读框(ORF)。平均每两千个碱基左右有一个基因。在G+C组成的交替区域变化之上,有一个G+C含量较低的大中央结构域,其中包含所有酵母转座子(Ty)元件和大部分tRNA基因。第四条染色体与第二条、第五条、第十二条、第十三条和第十五条染色体有一些长的成簇重复序列,这部分解释了它的起源。

相似文献

1
The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.酿酒酵母第四条染色体的核苷酸序列。
Nature. 1997 May 29;387(6632 Suppl):75-8.
2
The nucleotide sequence of Saccharomyces cerevisiae chromosome XV.酿酒酵母第十五号染色体的核苷酸序列。
Nature. 1997 May 29;387(6632 Suppl):98-102.
3
The nucleotide sequence of Saccharomyces cerevisiae chromosome XIII.酿酒酵母第十三条染色体的核苷酸序列。
Nature. 1997 May 29;387(6632 Suppl):90-3.
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The nucleotide sequence of Saccharomyces cerevisiae chromosome XVI.酿酒酵母第十六条染色体的核苷酸序列。
Nature. 1997 May 29;387(6632 Suppl):103-5.
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Sequencing and analysis of 51.6 kilobases on the left arm of chromosome XI from Saccharomyces cerevisiae reveals 23 open reading frames including the FAS1 gene.对酿酒酵母XI号染色体左臂上51.6千碱基的序列进行测序和分析,发现了23个开放阅读框,其中包括FAS1基因。
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DNA sequence analysis of a 23,002 bp DNA fragment of the right arm of Saccharomyces cerevisiae chromosome VII.酿酒酵母七号染色体右臂23,002碱基对DNA片段的DNA序列分析
Yeast. 1997 Mar 30;13(4):357-63. doi: 10.1002/(SICI)1097-0061(19970330)13:4<357::AID-YEA77>3.0.CO;2-J.
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The nucleotide sequence of Saccharomyces cerevisiae chromosome VII.酿酒酵母七号染色体的核苷酸序列。
Nature. 1997 May 29;387(6632 Suppl):81-4.
8
Sequence and analysis of 24 kb on chromosome II of Saccharomyces cerevisiae.酿酒酵母二号染色体上24千碱基对的序列及分析
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Sequence analysis of 203 kilobases from Saccharomyces cerevisiae chromosome VII.酿酒酵母七号染色体203千碱基的序列分析。
Yeast. 1997 Sep 15;13(11):1077-90. doi: 10.1002/(SICI)1097-0061(19970915)13:11<1077::AID-YEA152>3.0.CO;2-Y.
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The sequence of a 44 420 bp fragment located on the left arm of chromosome XIV from Saccharomyces cerevisiae.位于酿酒酵母第十四条染色体左臂上一个44420碱基对片段的序列。
Yeast. 1995 Aug;11(10):967-74. doi: 10.1002/yea.320111008.

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