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枯草芽孢杆菌α/β型小酸溶性芽孢蛋白与DNA复合物的结晶及初步X射线分析

Crystallization and preliminary X-ray analysis of the complex between a Bacillus subtilis alpha/beta-type small acid-soluble spore protein and DNA.

作者信息

Bumbaca Daniela, Kosman Jeffrey, Setlow Peter, Henderson R Keith, Jedrzejas Mark J

机构信息

Children's Hospital Oakland Research Institute, Oakland, CA 94609, USA.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Jun 1;63(Pt 6):503-6. doi: 10.1107/S1744309107022750. Epub 2007 May 12.

Abstract

An engineered variant of an alpha/beta-type small acid-soluble spore protein (SASP) from Bacillus subtilis was crystallized in a complex with a ten-base-pair double-stranded DNA by the hanging-drop vapor-diffusion method using ammonium sulfate as a precipitating agent. Crystals grew at 281 K using sodium cacodylate buffer pH 5.5 and these crystals diffracted X-rays to beyond 2.4 A resolution using synchrotron radiation. The crystallized complex contains two or three SASP molecules bound to one DNA molecule. The crystals belong to the hexagonal space group P6(1)22 or P6(5)22, with unit-cell parameters a = b = 87.0, c = 145.4 A, alpha = beta = 90.0, gamma = 120.0 degrees. Diffraction data were 96.6% complete to 2.4 A resolution, with an R(sym) of 8.5%. Structure solution by the multiwavelength/single-wavelength anomalous dispersion method using isomorphous crystals of selenomethionine-labeled protein is in progress.

摘要

通过悬滴气相扩散法,以硫酸铵作为沉淀剂,使枯草芽孢杆菌α/β型小酸溶性芽孢蛋白(SASP)的一种工程变体与一段十碱基对的双链DNA形成复合物并结晶。使用pH 5.5的二甲胂酸钠缓冲液,在281 K条件下晶体生长,利用同步辐射,这些晶体的X射线衍射分辨率超过2.4 Å。结晶复合物包含与一个DNA分子结合的两个或三个SASP分子。晶体属于六方空间群P6(1)22或P6(5)22,晶胞参数a = b = 87.0,c = 145.4 Å,α = β = 90.0,γ = 120.0°。衍射数据在2.4 Å分辨率下的完整性为96.6%,R(sym)为8.5%。使用硒代甲硫氨酸标记蛋白的同晶型晶体,通过多波长/单波长反常色散法进行结构解析正在进行中。

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