• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

病理图像的登记

Registration of Pathological Images.

作者信息

Yang Xiao, Han Xu, Park Eunbyung, Aylward Stephen, Kwitt Roland, Niethammer Marc

机构信息

UNC Chapel Hill, Chapel Hill, USA.

Kitware, Inc., USA.

出版信息

Simul Synth Med Imaging. 2016 Oct;9968:97-107. doi: 10.1007/978-3-319-46630-9_10. Epub 2016 Sep 23.

DOI:10.1007/978-3-319-46630-9_10
PMID:29896582
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5994389/
Abstract

This paper proposes an approach to improve atlas-to-image registration accuracy with large pathologies. Instead of directly registering an atlas to a pathological image, the method learns a mapping from the pathological image to a quasi-normal image, for which more accurate registration is possible. Specifically, the method uses a deep variational convolutional encoder-decoder network to learn the mapping. Furthermore, the method estimates local mapping uncertainty through network inference statistics and uses those estimates to down-weight the image registration similarity measure in areas of high uncertainty. The performance of the method is quantified using synthetic brain tumor images and images from the brain tumor segmentation challenge (BRATS 2015).

摘要

本文提出了一种提高带有大病变的图谱到图像配准精度的方法。该方法不是直接将图谱配准到病理图像,而是学习从病理图像到准正常图像的映射,对于准正常图像可以进行更精确的配准。具体而言,该方法使用深度变分卷积编码器-解码器网络来学习这种映射。此外,该方法通过网络推理统计估计局部映射不确定性,并使用这些估计值在高不确定性区域降低图像配准相似性度量的权重。使用合成脑肿瘤图像和来自脑肿瘤分割挑战赛(BRATS 2015)的图像对该方法的性能进行了量化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/231fa028f355/nihms971758f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/c5efbdede59b/nihms971758f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/6415aa0deff3/nihms971758f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/9f35499c99f8/nihms971758f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/231fa028f355/nihms971758f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/c5efbdede59b/nihms971758f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/6415aa0deff3/nihms971758f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/9f35499c99f8/nihms971758f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9cf/5994389/231fa028f355/nihms971758f4.jpg

相似文献

1
Registration of Pathological Images.病理图像的登记
Simul Synth Med Imaging. 2016 Oct;9968:97-107. doi: 10.1007/978-3-319-46630-9_10. Epub 2016 Sep 23.
2
Iterative deep convolutional encoder-decoder network for medical image segmentation.用于医学图像分割的迭代深度卷积编码器-解码器网络
Annu Int Conf IEEE Eng Med Biol Soc. 2017 Jul;2017:685-688. doi: 10.1109/EMBC.2017.8036917.
3
MR-based synthetic CT generation using a deep convolutional neural network method.基于磁共振成像利用深度卷积神经网络方法生成合成CT图像
Med Phys. 2017 Apr;44(4):1408-1419. doi: 10.1002/mp.12155. Epub 2017 Mar 21.
4
A Deep Network for Joint Registration and Reconstruction of Images with Pathologies.一种用于联合配准和重建病变图像的深度网络。
Mach Learn Med Imaging. 2020 Oct;12436:342-352. doi: 10.1007/978-3-030-59861-7_35. Epub 2020 Sep 29.
5
SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation.SegNet:一种用于图像分割的深度卷积编解码器架构。
IEEE Trans Pattern Anal Mach Intell. 2017 Dec;39(12):2481-2495. doi: 10.1109/TPAMI.2016.2644615. Epub 2017 Jan 2.
6
Evaluation of atlas selection strategies for atlas-based image segmentation with application to confocal microscopy images of bee brains.基于图谱的图像分割中图谱选择策略的评估及其在蜜蜂大脑共聚焦显微镜图像中的应用
Neuroimage. 2004 Apr;21(4):1428-42. doi: 10.1016/j.neuroimage.2003.11.010.
7
Multi-atlas active contour segmentation method using template optimization algorithm.基于模板优化算法的多图谱主动轮廓分割方法。
BMC Med Imaging. 2019 May 24;19(1):42. doi: 10.1186/s12880-019-0340-6.
8
Feasibility of Image Registration for Ultrasound-Guided Prostate Radiotherapy Based on Similarity Measurement by a Convolutional Neural Network.基于卷积神经网络相似性测量的超声引导前列腺放射治疗图像配准的可行性。
Technol Cancer Res Treat. 2019 Jan 1;18:1533033818821964. doi: 10.1177/1533033818821964.
9
Comparison of the automatic segmentation of multiple organs at risk in CT images of lung cancer between deep convolutional neural network-based and atlas-based techniques.基于深度学习卷积神经网络与图谱法的肺癌 CT 图像多危及器官自动勾画比较。
Acta Oncol. 2019 Feb;58(2):257-264. doi: 10.1080/0284186X.2018.1529421. Epub 2018 Nov 6.
10
A novel end-to-end brain tumor segmentation method using improved fully convolutional networks.一种使用改进的全卷积网络的新型端到端脑肿瘤分割方法。
Comput Biol Med. 2019 May;108:150-160. doi: 10.1016/j.compbiomed.2019.03.014. Epub 2019 Mar 18.

引用本文的文献

1
A review of deep learning-based deformable medical image registration.基于深度学习的可变形医学图像配准综述。
Front Oncol. 2022 Dec 7;12:1047215. doi: 10.3389/fonc.2022.1047215. eCollection 2022.
2
A Deep Network for Joint Registration and Reconstruction of Images with Pathologies.一种用于联合配准和重建病变图像的深度网络。
Mach Learn Med Imaging. 2020 Oct;12436:342-352. doi: 10.1007/978-3-030-59861-7_35. Epub 2020 Sep 29.
3
Anomaly detection for the individual analysis of brain PET images.用于脑PET图像个体分析的异常检测

本文引用的文献

1
Low-Rank Atlas Image Analyses in the Presence of Pathologies.存在病变情况下的低秩图谱图像分析
IEEE Trans Med Imaging. 2015 Dec;34(12):2583-91. doi: 10.1109/TMI.2015.2448556. Epub 2015 Jun 22.
2
The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).多模态脑肿瘤图像分割基准(BRATS)。
IEEE Trans Med Imaging. 2015 Oct;34(10):1993-2024. doi: 10.1109/TMI.2014.2377694. Epub 2014 Dec 4.
3
MR to CT Registration of Brains using Image Synthesis.使用图像合成技术实现脑部的磁共振成像到计算机断层扫描配准
J Med Imaging (Bellingham). 2021 Mar;8(2):024003. doi: 10.1117/1.JMI.8.2.024003. Epub 2021 Apr 5.
4
Cortical Thickness Estimation in Individuals With Cerebral Small Vessel Disease, Focal Atrophy, and Chronic Stroke Lesions.患有脑小血管疾病、局灶性萎缩和慢性中风病灶的个体的皮质厚度估计
Front Neurosci. 2020 Dec 14;14:598868. doi: 10.3389/fnins.2020.598868. eCollection 2020.
5
Testing a convolutional neural network-based hippocampal segmentation method in a stroke population.基于卷积神经网络的脑卒中人群海马分割方法的测试。
Hum Brain Mapp. 2022 Jan;43(1):234-243. doi: 10.1002/hbm.25210. Epub 2020 Oct 16.
6
Patient-Specific Registration of Pre-operative and Post-recurrence Brain Tumor MRI Scans.术前及复发后脑肿瘤磁共振成像扫描的患者特异性配准
Brainlesion. 2019;11383:105-114. doi: 10.1007/978-3-030-11723-8_10. Epub 2019 Jan 26.
7
EFFICIENT REGISTRATION OF PATHOLOGICAL IMAGES: A JOINT PCA/IMAGE-RECONSTRUCTION APPROACH.病理图像的高效配准:一种主成分分析/图像重建联合方法。
Proc IEEE Int Symp Biomed Imaging. 2017 Apr;2017:10-14. doi: 10.1109/ISBI.2017.7950456. Epub 2017 Jun 19.
8
Brain extraction from normal and pathological images: A joint PCA/Image-Reconstruction approach.从正常和病理性图像中提取脑区:一种联合 PCA/图像重建的方法。
Neuroimage. 2018 Aug 1;176:431-445. doi: 10.1016/j.neuroimage.2018.04.073. Epub 2018 May 4.
9
Multimodal MR Synthesis via Modality-Invariant Latent Representation.基于模态不变潜在表示的多模态磁共振合成。
IEEE Trans Med Imaging. 2018 Mar;37(3):803-814. doi: 10.1109/TMI.2017.2764326. Epub 2017 Oct 18.
Proc SPIE Int Soc Opt Eng. 2014 Mar 21;9034. doi: spie.org/Publications/Proceedings/Paper/10.1117/12.2043954.
4
Comparative evaluation of registration algorithms in different brain databases with varying difficulty: results and insights.不同难度的不同脑数据库中配准算法的比较评估:结果与见解
IEEE Trans Med Imaging. 2014 Oct;33(10):2039-65. doi: 10.1109/TMI.2014.2330355. Epub 2014 Jun 13.
5
MAGNETIC RESONANCE IMAGE SYNTHESIS THROUGH PATCH REGRESSION.基于块回归的磁共振图像合成
Proc IEEE Int Symp Biomed Imaging. 2013 Dec 31;2013:350-353. doi: 10.1109/ISBI.2013.6556484.
6
Multi-modal registration for correlative microscopy using image analogies.使用图像类比的相关显微镜多模态配准。
Med Image Anal. 2014 Aug;18(6):914-26. doi: 10.1016/j.media.2013.12.005. Epub 2013 Dec 18.
7
Neuroimaging of structural pathology and connectomics in traumatic brain injury: Toward personalized outcome prediction.创伤性脑损伤的结构病理学和连接组学神经影像学:迈向个体化预后预测。
Neuroimage Clin. 2012 Aug 24;1(1):1-17. doi: 10.1016/j.nicl.2012.08.002. eCollection 2012.
8
SEGMENTATION OF SERIAL MRI OF TBI PATIENTS USING PERSONALIZED ATLAS CONSTRUCTION AND TOPOLOGICAL CHANGE ESTIMATION.利用个性化图谱构建和拓扑变化估计对创伤性脑损伤患者的序列磁共振成像进行分割
Proc IEEE Int Symp Biomed Imaging. 2012:1152-1155. doi: 10.1109/isbi.2012.6235764.
9
GLISTR: glioma image segmentation and registration.GLISTR:脑胶质瘤图像分割与配准。
IEEE Trans Med Imaging. 2012 Oct;31(10):1941-54. doi: 10.1109/TMI.2012.2210558. Epub 2012 Aug 13.
10
Geometric metamorphosis.几何变形
Med Image Comput Comput Assist Interv. 2011;14(Pt 2):639-46. doi: 10.1007/978-3-642-23629-7_78.