Allegra Mascaro Anna Letizia, Falotico Egidio, Petkoski Spase, Pasquini Maria, Vannucci Lorenzo, Tort-Colet Núria, Conti Emilia, Resta Francesco, Spalletti Cristina, Ramalingasetty Shravan Tata, von Arnim Axel, Formento Emanuele, Angelidis Emmanouil, Blixhavn Camilla H, Leergaard Trygve B, Caleo Matteo, Destexhe Alain, Ijspeert Auke, Micera Silvestro, Laschi Cecilia, Jirsa Viktor, Gewaltig Marc-Oliver, Pavone Francesco S
Neuroscience Institute, National Research Council, Pisa, Italy.
European Laboratory for Non-Linear Spectroscopy, Sesto Fiorentino, Italy.
Front Syst Neurosci. 2020 Jul 7;14:31. doi: 10.3389/fnsys.2020.00031. eCollection 2020.
Being able to replicate real experiments with computational simulations is a unique opportunity to refine and validate models with experimental data and redesign the experiments based on simulations. However, since it is technically demanding to model all components of an experiment, traditional approaches to modeling reduce the experimental setups as much as possible. In this study, our goal is to replicate all the relevant features of an experiment on motor control and motor rehabilitation after stroke. To this aim, we propose an approach that allows continuous integration of new experimental data into a computational modeling framework. First, results show that we could reproduce experimental object displacement with high accuracy via the simulated embodiment in the virtual world by feeding a spinal cord model with experimental registration of the cortical activity. Second, by using computational models of multiple granularities, our preliminary results show the possibility of simulating several features of the brain after stroke, from the local alteration in neuronal activity to long-range connectivity remodeling. Finally, strategies are proposed to merge the two pipelines. We further suggest that additional models could be integrated into the framework thanks to the versatility of the proposed approach, thus allowing many researchers to achieve continuously improved experimental design.
能够通过计算模拟复制真实实验,是利用实验数据完善和验证模型并基于模拟重新设计实验的独特机会。然而,由于对实验的所有组件进行建模在技术上要求很高,传统的建模方法会尽可能简化实验设置。在本研究中,我们的目标是复制中风后运动控制和运动康复实验的所有相关特征。为此,我们提出了一种方法,允许将新的实验数据持续集成到计算建模框架中。首先,结果表明,通过向脊髓模型输入皮层活动的实验记录,我们可以在虚拟世界中通过模拟化身高精度地再现实验对象的位移。其次,通过使用多种粒度的计算模型,我们的初步结果表明,模拟中风后大脑的几个特征是可能的,从神经元活动的局部改变到远程连接重塑。最后,提出了合并这两个管道的策略。我们进一步建议,由于所提出方法的通用性,可以将更多模型集成到框架中,从而使许多研究人员能够实现不断改进的实验设计。