• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

新种和新种,从沙漠生物结皮中分离得到。

sp. nov. and sp. nov., isolated from desert biocrust.

机构信息

Institute for Integrative Systems Biology I2SysBio (Universitat de València-CSIC), Calle del Catedràtic Agustin Escardino Benlloch 9, 46980 Paterna, Spain.

Darwin Bioprospecting Excellence SL. Parc Científic Universitat de València, Calle del Catedràtic Agustin Escardino Benlloch 9, 46980 Paterna, Spain.

出版信息

Int J Syst Evol Microbiol. 2021 Jul;71(7). doi: 10.1099/ijsem.0.004837.

DOI:10.1099/ijsem.0.004837
PMID:34292142
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8489839/
Abstract

Two novel Gram-staining-negative, aerobic, cocci-shaped, non-motile, non-spore forming, pink-pigmented bacteria designated strains T6 and T18, were isolated from a biocrust (biological soil crust) sample from the vicinity of the Tabernas Desert (Spain). Both strains were catalase-positive and oxidase-negative, and grew under mesophilic, neutrophilic and non-halophilic conditions. According to the 16S rRNA gene sequences, strains T6 and T18 showed similarities with CGMCC 1.10758 and CP2C (98.11 and 98.55% gene sequence similarity, respectively). The DNA G+C content was 69.80 and 68.96% for strains T6 and T18, respectively; the average nucleotide identity by blast (ANIb) and digital DNA-DNA hybridization (dDDH) values confirmed their adscription to two novel species within the genus . The predominant fatty acids were summed feature 8 (Cω7Cω6), C, C 2-OH and summed feature 3 (Cω7Cω6). According to he results of the polyphasic study, strains T6 and T18 represent two novel species in the genus (which currently includes only three species), for which names sp. nov. (type strain T6 = CECT 30228=DSM 112073) and sp. nov. (type strain T18=CECT 30229=DSM 112074) are proposed, respectively.

摘要

两株新型革兰氏阴性、需氧、球形、非运动、非孢子形成、粉红色的细菌,分别命名为菌株 T6 和 T18,从西班牙塔贝纳斯沙漠(Tabernas Desert)附近的生物结皮(biological soil crust)样本中分离得到。两株菌均为过氧化氢酶阳性,氧化酶阴性,在中温、嗜中性和非嗜盐条件下生长。根据 16S rRNA 基因序列,菌株 T6 和 T18 与 CGMCC 1.10758 和 CP2C 的相似度最高(分别为 98.11%和 98.55%)。菌株 T6 和 T18 的 DNA G+C 含量分别为 69.80%和 68.96%;blast 全基因同源性(ANIb)和数字 DNA-DNA 杂交(dDDH)值的平均值证实它们属于 属内的两个新种。主要脂肪酸为 sumFeature8(Cω7Cω6)、C 16:0、C 2-OH 和 sumFeature3(Cω7Cω6)。根据多相研究结果,菌株 T6 和 T18 代表 属中的两个新种(目前该属仅包括三个种),分别命名为 sp. nov.(T6 株=CECT 30228=DSM 112073)和 sp. nov.(T18 株=CECT 30229=DSM 112074)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d32/8489839/34174e392c21/ijsem-71-4837-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d32/8489839/e18f45ccef58/ijsem-71-4837-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d32/8489839/34174e392c21/ijsem-71-4837-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d32/8489839/e18f45ccef58/ijsem-71-4837-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3d32/8489839/34174e392c21/ijsem-71-4837-g002.jpg

相似文献

1
sp. nov. and sp. nov., isolated from desert biocrust.新种和新种,从沙漠生物结皮中分离得到。
Int J Syst Evol Microbiol. 2021 Jul;71(7). doi: 10.1099/ijsem.0.004837.
2
Belnapia soli sp. nov., a proteobacterium isolated from grass soil.从草土中分离得到的土壤杆菌属新种 Belnapia soli sp. nov.
Int J Syst Evol Microbiol. 2013 Jun;63(Pt 6):1955-1959. doi: 10.1099/ijs.0.045302-0. Epub 2012 Sep 28.
3
Description of Belnapia rosea sp. nov. and emended description of the genus Belnapia Reddy et al. 2006.描述粉红贝氏菌的新种和贝氏菌属的修订描述 Reddy 等人,2006 年。
Int J Syst Evol Microbiol. 2012 Mar;62(Pt 3):705-709. doi: 10.1099/ijs.0.031021-0. Epub 2011 May 6.
4
sp. nov., from desert gravel soil.sp. nov.,来自沙漠砾石土壤。
Int J Syst Evol Microbiol. 2020 Nov;70(11):5711-5716. doi: 10.1099/ijsem.0.004467.
5
Siccirubricoccus deserti gen. nov., sp. nov., a proteobacterium isolated from a desert sample.沙漠嗜干红球菌,新属,新种,一种从沙漠样本中分离出的变形菌。
Int J Syst Evol Microbiol. 2017 Nov;67(11):4862-4867. doi: 10.1099/ijsem.0.002397. Epub 2017 Oct 6.
6
Trinickia dinghuensis sp. nov. and Trinickia fusca sp. nov., isolated from forest soil.鼎湖特里尼克菌新种和暗褐特里尼克菌新种,从森林土壤中分离得到。
Int J Syst Evol Microbiol. 2019 May;69(5):1390-1397. doi: 10.1099/ijsem.0.003324. Epub 2019 Feb 28.
7
sp. nov. and sp. nov., two novel species isolated from the honeycombs of .sp. nov. 和 sp. nov.,两种从 的蜂巢中分离得到的新型物种。
Int J Syst Evol Microbiol. 2021 Feb;71(2). doi: 10.1099/ijsem.0.004633.
8
Humitalea rosea gen. nov., sp. nov., an aerobic bacteriochlorophyll-containing bacterium of the family Acetobacteraceae isolated from soil.玫瑰色盐单胞菌属,新属,好氧细菌叶绿素含菌,醋酸杆菌科,从土壤中分离得到。
Int J Syst Evol Microbiol. 2013 Apr;63(Pt 4):1411-1416. doi: 10.1099/ijs.0.043018-0. Epub 2012 Jul 20.
9
sp. nov., isolated from marine plastic residues.sp. nov.,分离自海洋塑料残片。
Int J Syst Evol Microbiol. 2023 Feb;73(1). doi: 10.1099/ijsem.0.005677.
10
Izhakiella australiensis sp. nov. isolated from an Australian desert soil.新物种澳大利亚伊扎基菌,从澳大利亚沙漠土壤中分离得到。
Int J Syst Evol Microbiol. 2017 Nov;67(11):4317-4322. doi: 10.1099/ijsem.0.002171.

本文引用的文献

1
High Culturable Bacterial Diversity From a European Desert: The Tabernas Desert.来自欧洲沙漠——塔贝纳斯沙漠的高可培养细菌多样性
Front Microbiol. 2021 Jan 8;11:583120. doi: 10.3389/fmicb.2020.583120. eCollection 2020.
2
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy.TYGS 是一个自动化的高通量平台,用于最先进的基于基因组的分类学。
Nat Commun. 2019 May 16;10(1):2182. doi: 10.1038/s41467-019-10210-3.
3
UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction.
UBCG:用于系统发育树重建的最新细菌核心基因集和管道。
J Microbiol. 2018 Apr;56(4):280-285. doi: 10.1007/s12275-018-8014-6. Epub 2018 Feb 28.
4
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes.关于将基因组数据用于原核生物分类学的拟议最低标准。
Int J Syst Evol Microbiol. 2018 Jan;68(1):461-466. doi: 10.1099/ijsem.0.002516.
5
CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.系统发育树的置信区间:一种使用自展法的方法。
Evolution. 1985 Jul;39(4):783-791. doi: 10.1111/j.1558-5646.1985.tb00420.x.
6
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.JSpeciesWS:一个基于成对基因组比较进行原核生物物种界定的网络服务器。
Bioinformatics. 2016 Mar 15;32(6):929-31. doi: 10.1093/bioinformatics/btv681. Epub 2015 Nov 16.
7
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM:评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.
8
RASTtk: a modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes.RASTtk:一种用于构建定制注释管道和批量注释基因组的RAST算法的模块化可扩展实现。
Sci Rep. 2015 Feb 10;5:8365. doi: 10.1038/srep08365.
9
Genome sequence-based species delimitation with confidence intervals and improved distance functions.基于基因组序列的具有置信区间和改进距离函数的物种界定。
BMC Bioinformatics. 2013 Feb 21;14:60. doi: 10.1186/1471-2105-14-60.
10
QUAST: quality assessment tool for genome assemblies.QUAST:基因组组装质量评估工具。
Bioinformatics. 2013 Apr 15;29(8):1072-5. doi: 10.1093/bioinformatics/btt086. Epub 2013 Feb 19.