College of Agronomy, Guizhou University, Guiyang 550025, China.
Institute of Crop Science, Chinese Academy of Agriculture Science, Beijing 100081, China.
Int J Mol Sci. 2022 Oct 17;23(20):12434. doi: 10.3390/ijms232012434.
GATA is a transcription factor that exerts a vital function in plant growth and development, physiological metabolism, and environmental responses. However, the gene family has rarely been studied in Tartary buckwheat since the completion of its genome. This study used bioinformatics methods to identify genes of Tartary buckwheat and to analyze their subfamily classification, structural composition, and developmental evolution, as well as to discuss the expression patterns of genes in different subfamilies. The twenty-eight identified genes in the Tartary buckwheat genome were divided into four subfamilies and distributed on eight chromosomes. One pair of tandem repeat genes and eight pairs of fragments were found in chromosome mapping. Spatiotemporal expression patterns of eight genes in different subfamilies indicated that the gene family has regulatory roles in tissue specificity, fruit development, abiotic stress, and hormonal responses. This study creates a theoretical and scientific foundation for further research on the evolutionary relationship and biological function of .
GATA 是一种转录因子,在植物生长发育、生理代谢和环境响应中发挥着重要作用。然而,自 Tartary 荞麦基因组完成以来,该基因家族在 Tartary 荞麦中的研究很少。本研究采用生物信息学方法鉴定 Tartary 荞麦基因,并分析其亚家族分类、结构组成和发育进化,同时讨论不同亚家族基因的表达模式。在 Tartary 荞麦基因组中鉴定出的 28 个基因被分为四个亚家族,并分布在 8 条染色体上。在染色体定位中发现了一对串联重复基因和八对片段。不同亚家族中 8 个基因的时空表达模式表明,该基因家族在组织特异性、果实发育、非生物胁迫和激素响应中具有调节作用。本研究为进一步研究 基因的进化关系和生物学功能奠定了理论和科学基础。