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甲型流感病毒反向疫苗学:从基因组测序到疫苗设计。

Reverse Vaccinology for Influenza A Virus: From Genome Sequencing to Vaccine Design.

机构信息

Department of Health and Drug Sciences, Università degli Studi di Catania (IT), Catania, Italy.

出版信息

Methods Mol Biol. 2023;2673:401-410. doi: 10.1007/978-1-0716-3239-0_27.

DOI:10.1007/978-1-0716-3239-0_27
PMID:37258929
Abstract

Reverse vaccinology (RV) consists in the identification of potentially protective antigens expressed by any organism starting from genomic information and derived from in silico analysis, with the aim of promoting the discovery of new candidate vaccines against different types of pathogens. This approach makes use of bioinformatics techniques to screen the whole genomic sequence of a specific pathogen for the identification of the epitopes that could elicit the best immune response. The use of in silico techniques allows to reduce dramatically both the time and cost required for the identification of a potential vaccine, also facilitating the laborious process of selection of those antigens that, with a traditional approach, would be completely impossible to detect or culture. RV methodologies have been successfully applied for the identification of new vaccines against serogroup B meningococcus (MenB), Bacillus anthracis, Streptococcus pneumonia, Staphylococcus aureus, Chlamydia pneumoniae, Porphyromonas gingivalis, Edwardsiella tarda, and Mycobacterium tuberculosis. As a case of study, we will go in depth into the application of RV techniques on Influenza A virus.

摘要

反向疫苗学(RV)是指从基因组信息和计算机分析中,鉴定任何生物体中可能具有保护作用的抗原,旨在促进针对不同类型病原体的新型候选疫苗的发现。这种方法利用生物信息学技术筛选特定病原体的整个基因组序列,以鉴定能够引起最佳免疫反应的表位。使用计算机技术可以大大减少鉴定潜在疫苗所需的时间和成本,同时还可以简化抗原选择这一繁琐的过程,对于传统方法来说,这些抗原完全不可能被检测或培养。RV 方法已成功应用于鉴定针对 B 群脑膜炎奈瑟球菌(MenB)、炭疽杆菌、肺炎链球菌、金黄色葡萄球菌、肺炎衣原体、牙龈卟啉单胞菌、迟缓爱德华菌和结核分枝杆菌等病原体的新型疫苗。作为一个研究案例,我们将深入探讨 RV 技术在甲型流感病毒中的应用。

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本文引用的文献

1
Transforming vaccine development.变革疫苗研发。
Semin Immunol. 2020 Aug;50:101413. doi: 10.1016/j.smim.2020.101413. Epub 2020 Oct 28.
2
NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data.NetMHCpan-4.1 和 NetMHCIIpan-4.0:通过同时对基序进行分解以及整合 MS MHC 洗脱配体数据,改进了 MHC 抗原呈递的预测。
Nucleic Acids Res. 2020 Jul 2;48(W1):W449-W454. doi: 10.1093/nar/gkaa379.
3
BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes.
BepiPred-2.0:利用构象表位改进基于序列的 B 细胞表位预测。
Nucleic Acids Res. 2017 Jul 3;45(W1):W24-W29. doi: 10.1093/nar/gkx346.
4
Enhancing the Biological Relevance of Machine Learning Classifiers for Reverse Vaccinology.增强机器学习分类器在反向疫苗学中的生物学相关性。
Int J Mol Sci. 2017 Feb 1;18(2):312. doi: 10.3390/ijms18020312.
5
Immunomics: a 21st century approach to vaccine development for complex pathogens.免疫组学:针对复杂病原体进行疫苗研发的21世纪方法。
Parasitology. 2016 Feb;143(2):236-44. doi: 10.1017/S0031182015001079.
6
The promise of reverse vaccinology.反向疫苗学的前景。
Int Health. 2015 Mar;7(2):85-9. doi: 10.1093/inthealth/ihv002.
7
AllerTOP v.2--a server for in silico prediction of allergens.AllerTOP v.2——一款用于过敏原计算机模拟预测的服务器。
J Mol Model. 2014 Jun;20(6):2278. doi: 10.1007/s00894-014-2278-5. Epub 2014 May 31.
8
Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.使用 Clustal Omega 快速、可扩展地生成高质量蛋白质多重序列比对。
Mol Syst Biol. 2011 Oct 11;7:539. doi: 10.1038/msb.2011.75.
9
Large-scale validation of methods for cytotoxic T-lymphocyte epitope prediction.细胞毒性T淋巴细胞表位预测方法的大规模验证
BMC Bioinformatics. 2007 Oct 31;8:424. doi: 10.1186/1471-2105-8-424.
10
VaxiJen: a server for prediction of protective antigens, tumour antigens and subunit vaccines.VaxiJen:一个用于预测保护性抗原、肿瘤抗原和亚单位疫苗的服务器。
BMC Bioinformatics. 2007 Jan 5;8:4. doi: 10.1186/1471-2105-8-4.