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小鼠基因组中具有单独逆转录病毒长末端重复序列结构特征的中等重复DNA序列家族。

Family of middle repetitive DNA sequences in the mouse genome with structural features of solitary retroviral long terminal repeats.

作者信息

Wirth T, Glöggler K, Baumruker T, Schmidt M, Horak I

出版信息

Proc Natl Acad Sci U S A. 1983 Jun;80(11):3327-30. doi: 10.1073/pnas.80.11.3327.

DOI:10.1073/pnas.80.11.3327
PMID:6304707
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC394035/
Abstract

Screening of a 129/J mouse genomic library under nonstringent hybridization conditions with a xenotropic virus-like long terminal repeat (LTR) probe revealed a family of sequences resembling insertion elements (IS) with structural features of solitary retroviral LTRs; these are called LTR-IS. They are interspersed among variable flanking regions of mouse DNA and lack any viral structural genes. LTR-IS elements start and end with 11-base-pair inverted repeats and contain signals implicated in RNA polymerase II transcriptional regulation: C-C-A-A-T, T-A-T-A-A-A, and A-A-T-A-A-A. The members of the family are homologous, but not identical, approximately equal to 500-base-pair-long elements with 4-base-pair target-site duplications on both sites of the element. There are 500 LTR-IS per mouse haploid genome.

摘要

在非严格杂交条件下,用嗜异性病毒样长末端重复序列(LTR)探针筛选129/J小鼠基因组文库,发现了一个类似于插入元件(IS)的序列家族,其具有单独逆转录病毒LTR的结构特征;这些被称为LTR-IS。它们散布在小鼠DNA的可变侧翼区域之间,并且缺乏任何病毒结构基因。LTR-IS元件以11个碱基对的反向重复序列开始和结束,并包含与RNA聚合酶II转录调控有关的信号:C-C-A-A-T、T-A-T-A-A-A和A-A-T-A-A-A。该家族成员具有同源性,但并不相同,是长度约为500个碱基对的元件,在元件两侧有4个碱基对的靶位点重复。每个小鼠单倍体基因组中有500个LTR-IS。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7210/394035/cb02eda308f7/pnas00637-0194-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7210/394035/cb02eda308f7/pnas00637-0194-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7210/394035/cb02eda308f7/pnas00637-0194-a.jpg

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