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短杆菌属,新属。一种来自酸杆菌门 1 亚纲的可水解纤维素的兼性厌氧菌,修订了 1991 年 Kishimoto 等人对荚膜菌属的描述。

Telmatobacter bradus gen. nov., sp. nov., a cellulolytic facultative anaerobe from subdivision 1 of the Acidobacteria, and emended description of Acidobacterium capsulatum Kishimoto et al. 1991.

机构信息

S. N. Winogradsky Institute of Microbiology, Russian Academy of Sciences, Prospect 60-letya Octyabrya 7/2, Moscow 117312, Russia.

G. K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino, Moscow Region 142292, Russia.

出版信息

Int J Syst Evol Microbiol. 2012 Feb;62(Pt 2):430-437. doi: 10.1099/ijs.0.029629-0. Epub 2011 Apr 1.

Abstract

A gram-negative, facultatively anaerobic, chemo-organotrophic, non-pigmented, slow-growing bacterium was isolated from acidic Sphagnum peat and designated strain TPB6017(T). Cells of this strain were long rods that multiplied by normal cell division and were motile by means of a single flagellum. Cells grew under reduced oxygen tension and under anoxic conditions and were able to ferment sugars and several polysaccharides, including amorphous and crystalline cellulose. Strain TPB6017(T) was a psychrotolerant acidophile capable of growth between pH 3.0 and 7.5 (optimum 4.5-5.0) and at 4-35 °C (optimum 20-28 °C). It was extremely sensitive to salt stress; growth was inhibited at NaCl concentrations above 0.1 % (w/v). The major fatty acids were iso-C(15 : 0) and iso-C(17 : 1)ω9c; the polar lipids were phosphatidylethanolamine and a number of phospholipids and aminophospholipids with an unknown structure. The quinone was MK-8. The DNA G+C content was 57.6 mol%. Comparative 16S rRNA gene sequence analysis revealed that strain TPB6017(T) was a member of subdivision 1 of the phylum Acidobacteria and belonged to a phylogenetic lineage defined by the acidophilic aerobic chemo-organotroph Acidobacterium capsulatum (92.3 % sequence similarity). However, cell morphology, type of flagellation, the absence of pigment, differences in fatty acid and polar lipid composition, possession of a cellulolytic capability, inability to grow under fully oxic conditions and good growth in anoxic conditions distinguished strain TPB6017(T) from A. capsulatum. Therefore, it is proposed that strain TPB6017(T) represents a novel acidobacterium species in a new genus, Telmatobacter bradus gen. nov., sp. nov.; strain TPB6017(T) ( = DSM 23630(T) = VKM B-2570(T)) is the type strain.

摘要

一株革兰氏阴性、兼性厌氧、化能有机营养型、非色素、生长缓慢的细菌从酸性泥炭中分离得到,并被命名为 TPB6017(T) 菌株。该菌株的细胞为长杆状,通过正常细胞分裂繁殖,通过单根鞭毛运动。细胞在低氧张力和缺氧条件下生长,并能够发酵糖和几种多糖,包括无定形和结晶纤维素。TPB6017(T) 菌株是一种耐冷嗜酸菌,能够在 pH 值 3.0 到 7.5 之间(最佳 pH 值为 4.5-5.0)和 4-35°C(最佳温度为 20-28°C)生长。它对盐胁迫极为敏感;在 NaCl 浓度高于 0.1%(w/v)时,生长受到抑制。主要脂肪酸为 iso-C(15:0) 和 iso-C(17:1)ω9c;极性脂为磷脂酰乙醇胺和一些具有未知结构的磷脂和氨基磷脂。醌为 MK-8。DNA G+C 含量为 57.6 mol%。比较 16S rRNA 基因序列分析表明,TPB6017(T) 菌株是酸杆菌门 1 亚门的成员,属于嗜酸好氧化能有机营养型嗜酸菌 Acidobacterium capsulatum(92.3%序列相似性)定义的系统发育谱系。然而,细胞形态、鞭毛类型、无色素、脂肪酸和极性脂组成的差异、具有纤维素分解能力、不能在完全好氧条件下生长和在缺氧条件下良好生长将 TPB6017(T) 菌株与 A. capsulatum 区分开来。因此,建议将 TPB6017(T) 菌株代表一个新的酸杆菌属中的新种,Telmatobacter bradus 属,新种;TPB6017(T) 菌株(=DSM 23630(T)=VKM B-2570(T))是模式菌株。

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